Protein Alignment tra2 and Eif4h

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001006958.1
• Gene: Eif4h / 288599
• RGDID: 1359222
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 211
• Identity: 52/211 - (24%)
• Similarity: 81/211 - (38%)
• Gaps: 45/211 - (21%)

  Fly    77 GRSSRDRERMHKSRE------HPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQ 135
            ||.||.....|.||.      .|..:..:|  .|..||.|..:..:|.... |..:::|.|..|.
  Rat    18 GRGSRGSAGGHGSRSQKELPTEPPYTAYVG--NLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTD 79

  Fly   136 RSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLG----------RQ 190
            :.:|||::.|:::...:.|. :..|..:..|.:|||.:..::......|...|          |:
  Rat    80 KFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLRVDIAEGRKQDKGGFGFRKGGPDDRGMGGSRE 143

  Fly   191 PRG--KAPRSFSP---------RRGRRVYHDRSASP--YDNYRDRYDYRNDRYDRNLRRSPSRNR 242
            |||  .:...||.         |.|.|. .||.|.|  ...:||....|....|   .|.|:..
  Rat   144 PRGGWDSRDDFSSGYRDDFLGGRGGSRP-GDRRAGPPMGSRFRDGPPLRGSNMD---FREPTEE- 203

  Fly   243 YTRNRSYSRSRSPQLR 258
                   .|::.|:|:
  Rat   204 -------ERAQRPRLQ 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	20/78 (26%)
Eif4h	NP_001006958.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..41		7/22 (32%)
		RRM_eIF4H	37..120	CDD:409835	21/86 (24%)
		SF-CC1	<40..>227	CDD:273721	45/189 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	121..248		24/104 (23%)