DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and RBMXL2

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_055284.3 Gene:RBMXL2 / 27288 HGNCID:17886 Length:392 Species:Homo sapiens


Alignment Length:153 Identity:48/153 - (31%)
Similarity:69/153 - (45%) Gaps:23/153 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            |||..|.:..:...|.|||.|..:.::.|.:|.:||||.|:.||..:||:||....:|..:||:.
Human    14 GLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKA 78

  Fly   168 IRV------DFSITQRAHTP-----TPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDN--Y 219
            |:|      .|..::|...|     .|....|.:..|..||. ||.||         .|.|:  |
Human    79 IKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPRR-SPSRG---------GPDDDGGY 133

  Fly   220 RDRYDYRNDRYDRNLRRSPSRNR 242
            ...:|.|..|....::|.|...|
Human   134 TADFDLRPSRAPMPMKRGPPPRR 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 28/77 (36%)
RBMXL2NP_055284.3 RRM_RBMX_like 7..86 CDD:409816 27/71 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..392 26/100 (26%)
RBM1CTR 173..217 CDD:400429
Blue background indicates that the domain is not in the aligned region.

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