DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and DAZAP1

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens


Alignment Length:135 Identity:37/135 - (27%)
Similarity:64/135 - (47%) Gaps:8/135 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKS-REHPQASRCIGVFGLNTNTSQHKVRELF 117
            :||..:....:.:..|..||......:|.:|...|. |.....|..|.|.|:..|..:.::||.|
Human   212 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYF 276

  Fly   118 NKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGI---EVDGRRIRVDFSITQRAH 179
            .|:|.:..:.|:.||:.||.|||.||.||   |.::. |....:   ::.|:::.|..:..:.:.
Human   277 KKFGVVTEVVMIYDAEKQRPRGFGFITFE---DEQSV-DQAVNMHFHDIMGKKVEVKRAEPRDSK 337

  Fly   180 TPTPG 184
            :..||
Human   338 SQAPG 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 26/81 (32%)
DAZAP1XP_011526206.1 ELAV_HUD_SF <106..199 CDD:273741
RRM1_DAZAP1 154..235 CDD:409988 5/22 (23%)
RRM2_DAZAP1 254..333 CDD:409765 26/82 (32%)
Blue background indicates that the domain is not in the aligned region.

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