Sequence 1: | NP_476764.1 | Gene: | tra2 / 36619 | FlyBaseID: | FBgn0003742 | Length: | 264 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001361548.1 | Gene: | Safb / 224903 | MGIID: | 2146974 | Length: | 939 | Species: | Mus musculus |
Alignment Length: | 315 | Identity: | 73/315 - (23%) |
---|---|---|---|
Similarity: | 108/315 - (34%) | Gaps: | 92/315 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DREPLSSGRLHCSARYKHKRSASSSSAGT-----------------TSSGHKDRRS-DYDYCGSR 48
Fly 49 RHQRS--SSRRRSRSRSSSESPPPEPRHRSGRSSR--------DRERMHKSREHPQASRCIGVFG 103
Fly 104 LNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKL---SDARAAKDSCSGI---- 161
Fly 162 EVDGR----------------RIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRR--GRRVY 208
Fly 209 HDRSASPYDNYRDRYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRS----PQLRR 259 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tra2 | NP_476764.1 | RRM | <74..242 | CDD:223796 | 42/200 (21%) |
RRM_TRA2 | 98..175 | CDD:240809 | 17/99 (17%) | ||
Safb | NP_001361548.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | ||
SAP | 31..65 | CDD:128789 | |||
PLN03124 | 32..>183 | CDD:215591 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 64..117 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 222..429 | ||||
RRM | 368..>527 | CDD:223796 | |||
RRM_SAFB1_SAFB2 | 427..502 | CDD:241123 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 499..661 | 28/106 (26%) | |||
Interaction with POLR2A, SFRS1, SFRS9 and SFRS10. /evidence=ECO:0000250|UniProtKB:O88453 | 550..814 | 64/285 (22%) | |||
Nuclear localization signal. /evidence=ECO:0000255 | 621..638 | 6/16 (38%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 684..738 | 8/53 (15%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |