| Sequence 1: | NP_476764.1 | Gene: | tra2 / 36619 | FlyBaseID: | FBgn0003742 | Length: | 264 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_035698.1 | Gene: | Alyref / 21681 | MGIID: | 1341044 | Length: | 255 | Species: | Mus musculus |
| Alignment Length: | Identity: | / - (0%) | |
|---|---|---|---|
| Similarity: | / - (0%) | Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| tra2 | NP_476764.1 | RRM_TRA2 | 96..175 | CDD:409798 | |
| Alyref | NP_035698.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..83 | ||
| N-terminal UAP56-binding motif. /evidence=ECO:0000250|UniProtKB:Q86V81 | 5..13 | ||||
| RNA-binding domain 1. /evidence=ECO:0000250|UniProtKB:Q86V81 | 13..103 | ||||
| Sufficient for RNA-binding, interaction with NXF1-NXT1 heterodimer. /evidence=ECO:0000250|UniProtKB:Q86V81 | 16..37 | ||||
| Required for interactions with EJC and multimerization. /evidence=ECO:0000250|UniProtKB:Q86V81 | 55..181 | ||||
| WXHD motif. /evidence=ECO:0000250|UniProtKB:Q86V81 | 86..89 | ||||
| RRM_THOC4 | 106..179 | CDD:410081 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 185..255 | ||||
| C-terminal UAP56-binding motif. /evidence=ECO:0000250|UniProtKB:Q86V81 | 241..249 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||