DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and Y57G11A.5

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_502757.2 Gene:Y57G11A.5 / 190364 WormBaseID:WBGene00013293 Length:110 Species:Caenorhabditis elegans


Alignment Length:93 Identity:21/93 - (22%)
Similarity:40/93 - (43%) Gaps:23/93 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 HKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYF------ 145
            ::.|:....:|.:.|..:..:.::.::..:|:..|||:.|.|     .:|..||.|:.|      
 Worm     7 NRKRKRNVENRQVYVGNMPFDATEKEIEAVFSVMGPIKSIWM-----AKRPPGFAFVTFKRTVHA 66

  Fly   146 ---------EKLSDARAAKDSCSGIEVD 164
                     :|:.|..|..:.|   |||
 Worm    67 FDAVKYLNGKKICDLEAKVEMC---EVD 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 20/84 (24%)
Y57G11A.5NP_502757.2 RRM_SF 19..87 CDD:473069 15/72 (21%)

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