Protein Alignment tra2 and rsp-6

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_741446.1
• Gene: rsp-6 / 177566
• WormBaseID: WBGene00004703
• Length: 179
• Species: Caenorhabditis elegans
• Alignment Length: 177
• Identity: 57/177 - (32%)
• Similarity: 86/177 - (48%)
• Gaps: 23/177 - (12%)

  Fly   101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDG 165
            |.||.::.:..::.|:|:::|.|.::.:     .:|..||.|:.::.:.||..|..:..|..:.|
 Worm     7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDGSRICG 66

  Fly   166 RRIRVDFSITQRAHTPTPGVYLG--------RQP----RGKAPRSFSPRRGRRVYHDRSASPYDN 218
            .|.||:.|..||......|...|        |.|    ||:: ||.|..|||....|||.   |.
 Worm    67 VRARVELSTGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRS-RSRSRDRGRDRSRDRSR---DR 127

  Fly   219 YRDRYDYRNDRYDRNLRRSPSRNR--YTRNRSYSRSRSPQLRRTSSR 263
            .|||...|:....|...|:.||:|  ..|:||:|:|||....|:.||
 Worm   128 SRDRSRDRSRERSRERERTRSRSRSPQERDRSHSKSRSRSRSRSRSR 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	20/73 (27%)
rsp-6	NP_741446.1	RRM_SRSF3_like	4..75	CDD:409808	19/72 (26%)