Protein Alignment tra2 and msi-1

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001369851.1
• Gene: msi-1 / 175514
• WormBaseID: WBGene00003423
• Length: 320
• Species: Caenorhabditis elegans
• Alignment Length: 133
• Identity: 35/133 - (26%)
• Similarity: 60/133 - (45%)
• Gaps: 20/133 - (15%)

  Fly    66 ESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVI 130
            |:.||...|...|.:.|.:......:.| ....||  ||:..|:...:|:.|.::|.:....::.
 Worm    17 ETSPPVDGHEEARLNADSDDGSHGSQDP-GKMFIG--GLSWQTTAENLRDYFGRFGEVNECMVMR 78

  Fly   131 DAQTQRSRGFCFIYF------EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAH----TPTPGV 185
            |..|:|:|||.||.|      :|:.:.|..       |:||::|....:..:|..    |.|..|
 Worm    79 DPATKRARGFGFITFVDPSSVDKVLNNREH-------ELDGKKIDPKVAFPKRTQAKLVTKTKKV 136

  Fly   186 YLG 188
            ::|
 Worm   137 FIG 139

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	23/84 (27%)
msi-1	NP_001369851.1	RRM1_MSI	46..121	CDD:409990	23/83 (28%)
		RRM2_MSI	135..208	CDD:240769	2/5 (40%)