Protein Alignment tra2 and RBMXL3

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001138818.1
• Gene: RBMXL3 / 139804
• HGNCID: 26859
• Length: 1067
• Species: Homo sapiens
• Alignment Length: 173
• Identity: 47/173 - (27%)
• Similarity: 73/173 - (42%)
• Gaps: 40/173 - (23%)

  Fly   103 GLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRR 167
            |||..|.:..::..|.|||.|.::.::.|.:|.:||||.|:.||..:||:||....:|..:||:.
Human    14 GLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKA 78

  Fly   168 IRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNYRDRYDYRNDRYDR 232
            |.|..:|               :|..|:.|...|            :|....|.|:.:|......
Human    79 IMVAQTI---------------KPAFKSSRWVPP------------TPGSGSRSRFSHRTRGGGS 116

  Fly   233 NLRRSPSRNRYTRNRSYS-------------RSRSPQLRRTSS 262
            :.:|.||:.|....|.|:             |.|.|..|..:|
Human   117 SPQRPPSQGRPDDGRGYAGYFDLWPYRAPMPRKRGPPPRHWAS 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	27/71 (38%)
RBMXL3	NP_001138818.1	RRM_RBMX_like	7..86	CDD:409816	28/86 (33%)
		PABP-1234	<10..206	CDD:130689	47/173 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	90..131		11/52 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	144..175		5/16 (31%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	267..305
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	357..1067