DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and Hrb27C

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_321133.5 Gene:Hrb27C / 1281194 VectorBaseID:AGAMI1_011503 Length:412 Species:Anopheles gambiae


Alignment Length:135 Identity:37/135 - (27%)
Similarity:58/135 - (42%) Gaps:19/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 MHKSR--------EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCF 142
            ||.|:        :|.:....:|  ||:..||...::..|::||.:....::.:.:|.|||||.|
Mosquito     1 MHPSKKMIPAELDDHEKGKLFVG--GLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGF 63

  Fly   143 IYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPT-----PGVYLGRQPRGKAP---RSF 199
            :.|....:...|.:: ....:|||.|.......:..|.|.     |.|:||..|.....   |||
Mosquito    64 VTFADPENVERALEN-GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSF 127

  Fly   200 SPRRG 204
            ..|.|
Mosquito   128 FCRYG 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 21/78 (27%)
Hrb27CXP_321133.5 RRM1_hnRNPA_hnRNPD_like 20..91 CDD:409763 21/73 (29%)
RRM_SF 106..185 CDD:473069 10/27 (37%)

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