Protein Alignment tra2 and snRNP-U1-70K

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: XP_565448.4
• Gene: snRNP-U1-70K / 1270305
• VectorBaseID: AGAMI1_003302
• Length: 435
• Species: Anopheles gambiae
• Alignment Length: 224
• Identity: 70/224 - (31%)
• Similarity: 103/224 - (45%)
• Gaps: 33/224 - (14%)

  Fly    49 RHQRSSSRRRSRSRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKV 113
            |.:|...|||.|:...:.....|      .::.|..::.::.|.|  .:.:.|..:|.:||:.|:
Mosquito    62 REERVERRRRERAEQVAYKLERE------IATWDPNQLLEATEDP--FKTLFVARINYDTSESKL 118

  Fly   114 RELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRA 178
            |..|..||.|::|.|:.|..|.:.||:.||.:|...|..||.....|.::||:|:.||   .:||
Mosquito   119 RREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVD---VERA 180

  Fly   179 HTPTPGVYLGRQPRGKAPRSF-----SPRRGRRVYHDRSASPYDNYRDRYDYRNDR----YDRNL 234
            .|          .:|..||..     ..|||....:.:.:...||.|:|..||.:|    .||..
Mosquito   181 RT----------VKGWLPRRLGGGLGGTRRGGPDVNIKHSGREDNERERERYRLEREREDRDRRE 235

  Fly   235 RRSPSRNRYTRNRSYSRSRSPQLRRTSSR 263
            |..|..||:.|.||.||.|.   ||..||
Mosquito   236 RDRPENNRFERRRSRSRDRD---RRHRSR 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	28/78 (36%)
snRNP-U1-70K	XP_565448.4	None