DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and MSI2

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_005257072.1 Gene:MSI2 / 124540 HGNCID:18585 Length:346 Species:Homo sapiens


Alignment Length:105 Identity:33/105 - (31%)
Similarity:52/105 - (49%) Gaps:13/105 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAK 155
            :|......||  ||:..||...:|:.|:|:|.|....::.|..|:|||||.|:.|   :|. |:.
Human    17 QHDPGKMFIG--GLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF---ADP-ASV 75

  Fly   156 DSCSG---IEVDGRRIRVDFSITQRAH----TPTPGVYLG 188
            |...|   .|:|.:.|....:..:||.    |.|..:::|
Human    76 DKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVG 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 27/81 (33%)
MSI2XP_005257072.1 RRM1_MSI2 17..109 CDD:410153 31/97 (32%)
RRM2_MSI 111..184 CDD:240769 1/5 (20%)

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