Sequence 1: | NP_476764.1 | Gene: | tra2 / 36619 | FlyBaseID: | FBgn0003742 | Length: | 264 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001070733.1 | Gene: | Hnrnpd / 11991 | MGIID: | 101947 | Length: | 355 | Species: | Mus musculus |
Alignment Length: | 277 | Identity: | 62/277 - (22%) |
---|---|---|---|
Similarity: | 108/277 - (38%) | Gaps: | 48/277 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 HCSARYKHKRSASSS-----------SAGTTSSGHKDRRSDYDYCGSRRHQRSSSRRRSR----- 60
Fly 61 ---SRSSSESPPPEPRHRSGRSSRDRERMHKSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGP 122
Fly 123 IERIQMVIDAQTQRSRGFCFIYF------EKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTP 181
Fly 182 TPGVYLGR-QPRGKAP-----RSFS------------PRRGRRVYHDRSASPYDNYRDRYDYRND 228
Fly 229 R--YDRNLRRSPSRNRY 243 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tra2 | NP_476764.1 | RRM | <74..242 | CDD:223796 | 47/193 (24%) |
RRM_TRA2 | 98..175 | CDD:240809 | 24/82 (29%) | ||
Hnrnpd | NP_001070733.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..91 | 2/11 (18%) | |
CBFNT | <60..78 | CDD:311868 | |||
RRM1_hnRNPD_like | 99..172 | CDD:241019 | 12/72 (17%) | ||
RRM2_hnRNPD | 183..257 | CDD:241027 | 24/73 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |