Protein Alignment tra2 and CIRBP

DIOPT Version :9

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001287758.1
• Gene: CIRBP / 1153
• HGNCID: 1982
• Length: 297
• Species: Homo sapiens
• Alignment Length: 170
• Identity: 59/170 - (34%)
• Similarity: 82/170 - (48%)
• Gaps: 23/170 - (13%)

  Fly   101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDG 165
            |.||:.:|::..:.::|:|||.|..:.:|.|.:|||||||.|:.||.:.||:.|..:.:|..|||
Human    10 VGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG 74

  Fly   166 RRIRVD---FSITQRAH------TPTPGVYLGRQPRGKAPRSFSPRRGRRVY-----HDRSASPY 216
            |:||||   .|...|:.      ....|.:.|.:.||   |.||...|.|.|     ..||.. |
Human    75 RQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRG---RGFSRGGGDRGYGGNRFESRSGG-Y 135

  Fly   217 DNYRDRYDYRNDR--YDRNLRRSPSRNRYTRNRSYSRSRS 254
            ...||.|..|:..  |.........|:.|.   ||.:|.|
Human   136 GGSRDYYSSRSQSGGYSDRSSGGSYRDSYD---SYGKSHS 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM	<74..242	CDD:223796	54/156 (35%)
		RRM_TRA2	98..175	CDD:240809	34/76 (45%)
CIRBP	NP_001287758.1	RRM	<3..>90	CDD:223796	34/79 (43%)
		RRM_CIRBP_RBM3	6..85	CDD:240895	33/74 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48034
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	2.010