Protein Alignment tra2 and SNRNP35

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_851030.1
• Gene: SNRNP35 / 11066
• HGNCID: 30852
• Length: 251
• Species: Homo sapiens
• Alignment Length: 194
• Identity: 55/194 - (28%)
• Similarity: 85/194 - (43%)
• Gaps: 42/194 - (21%)

  Fly   100 GVFG----------LNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFI-YFEKLSDARA 153
            ||.|          ||..|.:.|::|:|::||.|.|:::|.|..|..|:|:.|| |.|:.:..:|
Human    49 GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKA 113

  Fly   154 AKDSCSGIEVDGRRIRVDFSITQRAHTPTP---GVYLGRQPR------GKAPRSFSP-------- 201
            .:|: .|:.:|...|.||:.:.:......|   |..||.:..      |...|.|..
Human   114 YRDA-DGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVK 177

  Fly   202 ----RRGRRVYHDRSASPYDNY----RDRYDYRNDRYDRNLRRSPSR----NRYTRNRSYSRSR 253
                |.|:|...:||.|...::    ||| |:...|..|...|.|:|    |.:.|.|.:...|
Human   178 NDLYREGKRERRERSRSRERHWDSRTRDR-DHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	29/85 (34%)
SNRNP35	NP_851030.1	RRM_snRNP35	52..142	CDD:409683	27/90 (30%)