DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and RBM7

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens


Alignment Length:308 Identity:61/308 - (19%)
Similarity:101/308 - (32%) Gaps:108/308 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RRTRKRLYELAERIPGPFDYPLIGSMLLT-IGKS----------PLELVTHLMELMHHLPSPMR- 71
            ||.|:.     :....||..|...|..:: ||.|          |.::...::::..||.:|.| 
Human   129 RRERRE-----QAAAAPFPSPAPASPAISVIGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRY 188

  Fly    72 ---------------AWLGPFL----LVVVDRPEMVQDVLSSPDCVQKPFMYDFFRLSKGLFGAP 117
                           ..|||.|    |.....|...|. |.:|:...          :.|..|  
Human   189 HLQQARRQQVKQYLSTTLGPKLASQALTPPPGPSSAQP-LPAPETAH----------ATGPTG-- 240

  Fly   118 ADQWKRHRKLLNASFSPAALKSFVPTLNAKADQFTRELAGKVSGECFDVHKLLARYTLVTISSTT 182
                       :|..||.||.    |:.:.::   :||  .|||...||:......|.....|.:
Human   241 -----------SAPNSPMALL----TIGSSSE---KEL--PVSGNLLDVYSSQGVATPAITVSNS 285

  Fly   183 LGADLSVEKREVLEEYTSNAIQMFTNCFERIYKAWLHPDCVYRMTAAFREEEVRFKSFKQMSRKI 247
            ..|:|...|||:.|.                           ...|..:|.:      |:.:..:
Human   286 CPAELPNIKREISET---------------------------EAKALLKERQ------KKDNHNL 317

  Fly   248 ITMRQA--LLSETKQTKTEYQQDSDPE---ENQELPKAKI-FIERLEE 289
            |..|:.  :....|:..|...:.:|||   ....:.||.: :|.:|::
Human   318 IERRRRFNINDRIKELGTLIPKSNDPEMRWNKGTILKASVDYIRKLQK 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 15/78 (19%)
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 27/136 (20%)
Blue background indicates that the domain is not in the aligned region.

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