DRSC/TRiP Functional Genomics Resources

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Protein Alignment tra2 and Alyreffm4

DIOPT Version :10

Sequence 1:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001160109.1 Gene:Alyreffm4 / 100043224 MGIID:3782481 Length:289 Species:Mus musculus


Alignment Length:89 Identity:20/89 - (22%)
Similarity:43/89 - (48%) Gaps:1/89 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KSREHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDAR 152
            :.:.|......:.:..|:...|...::.||.::|.:::..:..| :..||.|...::||:.:||.
Mouse    77 RGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYD-RCGRSLGTAHVHFERKADAL 140

  Fly   153 AAKDSCSGIEVDGRRIRVDFSITQ 176
            .|....:|..:|||.:.:....:|
Mouse   141 KAMREYNGAPLDGRPMNIHLVTSQ 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 18/78 (23%)
Alyreffm4NP_001160109.1 RRM_THOC4 86..160 CDD:410081 18/74 (24%)

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