Protein Alignment tra2 and srsf4

DIOPT Version :10

• Sequence 1: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: XP_004911639.2
• Gene: srsf4 / 100038227
• XenbaseID: XB-GENE-493077
• Length: 741
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 77/298 - (25%)
• Similarity: 108/298 - (36%)
• Gaps: 89/298 - (29%)

  Fly     7 SSGRLHCSARYKHKRSASSSSAG--TTSSGHKDRRSDYDYCGSRRHQRSSSRRRSRSRSSSE--- 66
            |.||....:..|.:|::.|:|.|  |:.|..|.|:........||..||.|:.|..|||.|:
 Frog   384 SKGRRASRSASKERRASRSASKGRRTSRSASKGRQESRSVSKGRRESRSVSKGRRESRSVSKGRR 448

  Fly    67 -------------SPPPEPR----HRSGRSSR--------------DRERMHKSREHPQASRCIG 100
                         |...|.|    |..||:||              |.|| .|||...:
 Frog   449 ESRSVSKGRRETRSVSKERRGSSDHSKGRASRSQSKDRANGRDKSADSER-SKSRSRSR------ 506

  Fly   101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLS-----DARAAKDSCSG 160
              |.....||.|.|:        ||:....:....||:.      .:||     |.:...:|...
 Frog   507 --GRRETDSQSKERK--------ERVSRSTERSRSRSKE------RRLSRSNSRDKKGRNESTER 555

  Fly   161 IEVDGRRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRRGRRVYHDRSASPYDNYRDRYDY 225
            .|::.|:       ..|:|:        |:.|         .|.:...|.||...:...|.|...
 Frog   556 QELNSRK-------RDRSHS--------RERR---------NRSKDRDHIRSKDKHSRNRSRDRK 596

  Fly   226 RNDRYDRNLRRSPSRNRYTRNRSYSRSRSPQLRRTSSR 263
            |:...||:..|...|:| .|:||..|||..:..|.|||
 Frog   597 RSRSRDRSRERQSKRSR-DRSRSKERSRRSERSRRSSR 633

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	15/83 (18%)
srsf4	XP_004911639.2	RRM_SF	6..77	CDD:473069
		RRM_SF	104..176	CDD:473069
		PTZ00121	<248..716	CDD:173412	77/298 (26%)
		PRK12678	255..>469	CDD:237171	24/84 (29%)