DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT37

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_003761.3 Gene:KRT37 / 8688 HGNCID:6455 Length:449 Species:Homo sapiens


Alignment Length:480 Identity:123/480 - (25%)
Similarity:198/480 - (41%) Gaps:111/480 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SARRVTLNTRVSRAST----STPVGGASTSSRVGATSPTSPT----------------------R 40
            :|..:.|...|:.|:.    |||:|..|.     ...|||.|                      .
Human    39 NAASMCLLANVAHANRVRVGSTPLGRPSL-----CLPPTSHTACPLPGTCHIPGNIGICGAYGKN 98

  Fly    41 TSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRET------SNLKAVYEKE 99
            |....|||.::.||||||.|::::|.||.||:.|...| |.:...:..|      |..:.:.|.:
Human    99 TLNGHEKETMKFLNDRLANYLEKVRQLEQENAELETTL-LERSKCHESTVCPDYQSYFRTIEELQ 162

  Fly   100 LAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYN 164
                :|:|...| |.|:|.:.|                         :||:|..:.:        
Human   163 ----QKILCSKA-ENARLIVQI-------------------------DNAKLAADDF-------- 189

  Fly   165 QSLADRKKFEDQAKELALENERLRRQLDD-----LRKQLEAETLARVDLENQNQSLREE-LAFKD 223
                          .:.||:||...||.:     .:|.|:..|||:.|||.|.:||:|| |:.|.
Human   190 --------------RIKLESERSLHQLVEADKCGTQKLLDDATLAKADLEAQQESLKEEQLSLKS 240

  Fly   224 QVHTQELTETRS----RRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDN 284
            . |.||:...||    :.:||: :|:..:.      |.:.|.|:|.|||..:..|.:::|..:..
Human   241 N-HEQEVKILRSQLGEKFRIEL-DIEPTID------LNRVLGEMRAQYEAMVETNHQDVEQWFQA 297

  Fly   285 EIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRH 349
            :.:.:...|...::.......|:..:|..::.|..:.|........|...:.|.|:...||..:.
Human   298 QSEGISLQAMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAEDRYGTELAQM 362

  Fly   350 NQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDS 414
            ...|::||.:|..:|.::..|.||||.|:|:|..|:.|||.|..||..|:.:|.......|.:.:
Human   363 QSLISNLEEQLSEIRADLERQNQEYQVLLDVKARLENEIATYRNLLESEDCKLPCNPCSTPASCT 427

  Fly   415 GISSNGSHLTASASSRSGRVTPSGR 439
            ...|.|   ..:..|.||.....||
Human   428 SCPSCG---PVTGGSPSGHGASMGR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 100/371 (27%)
PRK13922 154..>221 CDD:473155 20/72 (28%)
LTD 474..574 CDD:460003
KRT37NP_003761.3 Head 1..104 14/69 (20%)
Filament 104..414 CDD:459643 100/370 (27%)
Coil 1A 105..139 17/34 (50%)
Linker 1 140..150 1/9 (11%)
Coil 1B 151..251 36/152 (24%)
Linker 12 252..267 3/15 (20%)
Coil 2 268..411 39/148 (26%)
Tail 416..449 6/35 (17%)
Blue background indicates that the domain is not in the aligned region.

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