Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001076823.1 | Gene: | lmnb3 / 733537 | XenbaseID: | XB-GENE-920613 | Length: | 582 | Species: | Xenopus tropicalis |
Alignment Length: | 573 | Identity: | 196/573 - (34%) |
---|---|---|---|
Similarity: | 327/573 - (57%) | Gaps: | 30/573 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 STSTPVGGASTSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNL 80
Fly 81 AQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVA 145
Fly 146 ENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLEN 210
Fly 211 QNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINR 275
Fly 276 EEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELEN 340
Fly 341 LLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIE 405
Fly 406 -SPGRPTTDSGISSNGSHLTASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTLSE 469
Fly 470 YSVNAAAKGDLEIIEADVEGRFIKLHNKGTEEINLTGWQLTRIAGD-EELAFKFSRGSKVLGGAS 533
Fly 534 VTIWSVDAGTAHDPPNNLVMK--KKWPVANSMRSVLANADKEVRVLSIYNTCG 584 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 132/355 (37%) |
ATP-synt_B | <67..>142 | CDD:304375 | 30/74 (41%) | ||
MreC | <178..>224 | CDD:302802 | 19/45 (42%) | ||
LTD | 473..574 | CDD:279300 | 31/103 (30%) | ||
lmnb3 | NP_001076823.1 | Filament | 29..385 | CDD:365827 | 132/355 (37%) |
LTD | 438..542 | CDD:376421 | 31/103 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7708 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 391 | 1.000 | Inparanoid score | I1944 |
OMA | 1 | 1.010 | - | - | QHG48052 | |
OrthoDB | 1 | 1.010 | - | - | D204815at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9565 | |
Panther | 1 | 1.100 | - | - | O | PTHR45721 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X632 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.080 |