DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and Krt81

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001159629.1 Gene:Krt81 / 64818 MGIID:1928858 Length:481 Species:Mus musculus


Alignment Length:425 Identity:109/425 - (25%)
Similarity:185/425 - (43%) Gaps:79/425 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRE--TSNLKAVYEKELAAARK 105
            :.:|||:::.||.:.|.:||::|.||.:|..|..:....|   ||:  .||::.::|..:.|.| 
Mouse   103 KHEEKEQIKCLNSKFAAFIDKVRFLEQQNKLLETKWQFYQ---NRKCCESNMEPLFEGYIEALR- 163

  Fly   106 LLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADR 170
                  :|...:|.|..||              ..|...|:.:...|:.||.|            
Mouse   164 ------REAECVEADSGRL--------------AAELNHAQESMEGYKKRYEE------------ 196

  Fly   171 KKFEDQAKELAL----ENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELT 231
                    |::|    |||.:.     |:|.::...|.:.|||...::|.:|..|..:::.:|..
Mouse   197 --------EVSLRATAENEFVA-----LKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEETR 248

  Fly   232 ETRSRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRA 296
            ...|  .|..:.|..::....:..:...:.|::.||:.....:|.|.|..|..:.:.:||...|.
Mouse   249 ILHS--HISDTSIVVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEIKATVIRH 311

  Fly   297 AQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQ 361
            .:......||:..:...|..|.|:::|.:..|..|.|.:.:.|...:.........:|.||..||
Mouse   312 GETLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEGALQ 376

  Fly   362 RMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTAS 426
            :.:.:||..|:|||.:|:.|:.||:||..|.:||.|||:||          ..|:   |:.....
Mouse   377 KAKQDMACLLKEYQEVMNSKLGLDVEITTYRRLLEGEEQRL----------CEGV---GAVNVCV 428

  Fly   427 ASSRSGRV----TPSGRR-----SATPGISGSSAV 452
            :|||.|.|    ..||.|     :.:...||:.||
Mouse   429 SSSRGGVVCGDLCVSGSRPVIGSACSAPCSGNLAV 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 93/361 (26%)
PRK13922 154..>221 CDD:473155 16/70 (23%)
LTD 474..574 CDD:460003
Krt81NP_001159629.1 Head. /evidence=ECO:0000250 1..106 0/2 (0%)
Keratin_2_head <3..102 CDD:465068
Filament 105..416 CDD:459643 93/361 (26%)
Coil 1A. /evidence=ECO:0000250 107..141 12/33 (36%)
Linker 1. /evidence=ECO:0000250 142..151 4/11 (36%)
Coil 1B. /evidence=ECO:0000250 152..252 29/145 (20%)
Linker 12. /evidence=ECO:0000250 253..269 2/15 (13%)
Coil 2. /evidence=ECO:0000250 270..413 40/142 (28%)
Tail. /evidence=ECO:0000250 414..481 17/63 (27%)
Blue background indicates that the domain is not in the aligned region.

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