Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005269082.1 | Gene: | PRPH / 5630 | HGNCID: | 9461 | Length: | 471 | Species: | Homo sapiens |
Alignment Length: | 486 | Identity: | 133/486 - (27%) |
---|---|---|---|
Similarity: | 231/486 - (47%) | Gaps: | 93/486 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SRASTSTPVGGASTSSRVGATSPTSPTR--------------------------TSRQQEKEELQ 51
Fly 52 HLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAK 116
Fly 117 LEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELA 181
Fly 182 LENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETR---SRRQIEISE 243
Fly 244 IDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVR 308
Fly 309 LMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQE 373
Fly 374 YQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTASASSRSGRV---- 434
Fly 435 ---TPSGRRSATPGISGSSAVKRRRTVIDES 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 107/358 (30%) |
ATP-synt_B | <67..>142 | CDD:304375 | 20/74 (27%) | ||
MreC | <178..>224 | CDD:302802 | 11/45 (24%) | ||
LTD | 473..574 | CDD:279300 | |||
PRPH | XP_005269082.1 | Filament_head | 13..95 | CDD:282575 | 13/56 (23%) |
Filament | 96..406 | CDD:278467 | 107/358 (30%) | ||
BAR | <199..373 | CDD:299863 | 52/219 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |