Protein Alignment LamC and nefma

DIOPT Version :9

• Sequence 1: NP_001260974.1
• Gene: LamC / 36615
• FlyBaseID: FBgn0010397
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001104684.2
• Gene: nefma / 553718
• ZFINID: ZDB-GENE-050522-205
• Length: 849
• Species: Danio rerio
• Alignment Length: 585
• Identity: 154/585 - (26%)
• Similarity: 250/585 - (42%)
• Gaps: 132/585 - (22%)

  Fly     4 RRVTLNTRVSRASTST-----------------------PVGGASTSSRVGATSPTSPTRTS--- 42
            ||| ::||.|.:|.|:                       ||..|..|:.:.:......|:.|
Zfish    13 RRV-MDTRTSYSSPSSGFRSQTWSRTSPSSSSYKRSFNVPVARAYGSAVLSSADSLDFTQNSIIN 76

  Fly    43 ----RQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELN-LAQDTVNRETSNLKAVYEKELAA 102
                |..|||:||.||||.|.|||::..||.:|.::..|:. |.|..|::  |.|..:|::||..
Zfish    77 GDYKRSNEKEQLQGLNDRFAGYIDKVHFLEQQNQQIEAEIQALRQKQVSQ--SQLGELYDQELQE 139

  Fly   103 ARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSL 167
            .|.:|::|..|||::::|...:.|:...|:.|.|::          ||:.|
Zfish   140 LRSMLEQTHHEKAQIQLDTDHIEEDIQRLRDRFDEE----------ARIRE-------------- 180

  Fly   168 ADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTE 232
                           |.|.:.|.   |:|.:....|.:.:||.:.|||::|:||....|.:|:::
Zfish   181 ---------------ETEAIVRA---LKKDMGDSALVKAELEKKVQSLQDEIAFIRNNHQEEISD 227

  Fly   233 TRSRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAA 297
            ..:  |::.|:|........:|.:..:|:|:|.|.||....|.:::|..:......|..||.:..
Zfish   228 LLA--QVQASQITVEKRDYQKADITDALREIRSQLEGHSTQNLQQVEDWFMCRYSKLTEAAEQNK 290

  Fly   298 QGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIAS------- 355
            .....|.:|:...|.::.....:|:::..|...|..::.::|:       |||..:||
Zfish   291 SAIKSARDEISDYRRQLQSKTVELESVRGTKESLERQLNDIED-------RHNNDLASLQETIHQ 348

  Fly   356 LEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSG--ISS 418
            ||.||:..:.|||..|:|||.|:::|::||:|||||.|||.|||...: ..|.|.|...|  :.|
Zfish   349 LENELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEESHFS-TFPYRQTVTKGPKVKS 412

  Fly   419 NGSHLTASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDLEII 483
            ....|..             :......|...:.|:..::.:||:......|.|   |||.|.|..
Zfish   413 EPPKLKV-------------QHKFVEEIIEETRVEDEKSEMDEALAEMAEELS---AAKEDEEGG 461

  Fly   484 EADVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKVLGGASVTIWSVDAGTAHDPP 548
            |.:.|.      .:|.|            .||:|...|...|.   |.....:.|..|..|...|
Zfish   462 EEEGEA------EEGEE------------GGDDEEGEKEDEGE---GEEEEVVASTQAKVASAAP 505

  Fly   549  548
            Zfish   506  505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LamC	NP_001260974.1	Filament	45..401	CDD:278467	108/363 (30%)
		ATP-synt_B	<67..>142	CDD:304375	23/75 (31%)
		MreC	<178..>224	CDD:302802	14/45 (31%)
		LTD	473..574	CDD:279300	19/76 (25%)
nefma	NP_001104684.2	Filament_head	7..80	CDD:282575	14/67 (21%)
		Filament	83..394	CDD:278467	108/363 (30%)
		VAD1-2	<664..>739	CDD:291956

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910