Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001001235.1 | Gene: | prph / 407916 | XenbaseID: | XB-GENE-493857 | Length: | 456 | Species: | Xenopus tropicalis |
Alignment Length: | 475 | Identity: | 132/475 - (27%) |
---|---|---|---|
Similarity: | 229/475 - (48%) | Gaps: | 93/475 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SRASTSTPVGGAS--TSSRVGATS----PTSPTR-------------------TSRQQEKEELQH 52
Fly 53 LNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKL 117
Fly 118 EIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELAL 182
Fly 183 ENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGR 247
Fly 248 LSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRT 312
Fly 313 KIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGL 377
Fly 378 MDIKVSLDLEIAAYDKLLCGEERR----------LNIESPGRPTTDSGISSNGSH-----LTASA 427
Fly 428 SSRSGR--VTPSGRRSATPG 445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 103/355 (29%) |
ATP-synt_B | <67..>142 | CDD:304375 | 20/74 (27%) | ||
MreC | <178..>224 | CDD:302802 | 11/45 (24%) | ||
LTD | 473..574 | CDD:279300 | |||
prph | NP_001001235.1 | Filament_head | 10..87 | CDD:368088 | 13/55 (24%) |
Filament | 88..397 | CDD:365827 | 103/355 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |