Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_988944.1 | Gene: | krt18.1 / 394541 | XenbaseID: | XB-GENE-5820467 | Length: | 429 | Species: | Xenopus tropicalis |
Alignment Length: | 402 | Identity: | 108/402 - (26%) |
---|---|---|---|
Similarity: | 190/402 - (47%) | Gaps: | 65/402 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SARRVTLNTRVSRASTSTPVG--GASTSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRM 64
Fly 65 RNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEEND 129
Fly 130 DLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFE-DQAKELALENERLRRQLDD 193
Fly 194 LRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSR--RQIEISEIDGRLSRQYEAKL 256
Fly 257 QQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKL 321
Fly 322 QNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDL 386
Fly 387 EIAAYDKLLCGE 398 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 98/357 (27%) |
ATP-synt_B | <67..>142 | CDD:304375 | 15/74 (20%) | ||
MreC | <178..>224 | CDD:302802 | 14/45 (31%) | ||
LTD | 473..574 | CDD:279300 | |||
krt18.1 | NP_988944.1 | Head. /evidence=ECO:0000255 | 2..78 | 9/44 (20%) | |
Filament | 78..384 | CDD:306535 | 97/354 (27%) | ||
Coil 1A. /evidence=ECO:0000255 | 79..114 | 18/36 (50%) | |||
Linker 1. /evidence=ECO:0000255 | 115..130 | 3/14 (21%) | |||
Coil 1B. /evidence=ECO:0000255 | 131..222 | 29/133 (22%) | |||
Linker 12. /evidence=ECO:0000255 | 223..246 | 5/26 (19%) | |||
Coil 2. /evidence=ECO:0000255 | 247..385 | 39/137 (28%) | |||
Tail. /evidence=ECO:0000255 | 386..429 | 108/402 (27%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |