DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT82

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_149022.3 Gene:KRT82 / 3888 HGNCID:6459 Length:513 Species:Homo sapiens


Alignment Length:526 Identity:128/526 - (24%)
Similarity:211/526 - (40%) Gaps:159/526 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRASTSTPVGGASTSSRVGATSP--------------------------------TSPT-RTSRQ 44
            ||:..:...|....:||.|.|.|                                ..|| :..::
Human    54 SRSLCNVGFGRPRVASRCGGTLPGFGYRLGATCGPSACITPVTINESLLVPLALEIDPTVQRVKR 118

  Fly    45 QEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDE 109
            .|||:::.||:|.|.:|:::|.||.:|..|..:.|..|.....:| |::.::|..::|.|:.||.
Human   119 DEKEQIKCLNNRFASFINKVRFLEQKNKLLETKWNFMQQQRCCQT-NIEPIFEGYISALRRQLDC 182

  Fly   110 TAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFE 174
            .:.::.:||.::..|....:..|                                      ||:|
Human   183 VSGDRVRLESELCSLQAALEGYK--------------------------------------KKYE 209

  Fly   175 DQAKELAL----ENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRS 235
            :   ||:|    |||.:.     |:|.::...|.:.|||...::|.:|:.|...::.:|:...:|
Human   210 E---ELSLRPCVENEFVA-----LKKDVDTAFLMKADLETNAEALVQEIDFLKSLYEEEICLLQS 266

  Fly   236 R-------------RQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQ 287
            :             |::::..|...:..||:....:|..|....|:    ...||:.:...|...
Human   267 QISETSVIVKMDNSRELDVDGIIAEIKAQYDDIASRSKAEAEAWYQ----CRYEELRVTAGNHCD 327

  Fly   288 NLKAAANRAAQGSAL------ATEEVRLMRTKIDGLNAKLQNLEDTNAGLN-ARIRELENLLDTE 345
            ||:...|...:.:.|      .||.|:..|.|::|..|:.:  :...|.|| |:.:         
Human   328 NLRNRKNEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAE--QQGEAALNDAKCK--------- 381

  Fly   346 RQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRP 410
                   :|.||..||:.:.:||..|:|||.:|:.|:.||:|||.|.:||.|||.|| .|..| |
Human   382 -------LAGLEEALQKAKQDMACLLKEYQEVMNSKLGLDIEIATYRRLLEGEEHRL-CEGIG-P 437

  Fly   411 TTDSGISSNGSHL------------TASASSRSG--------RVTP----------SGRRSA-TP 444
            ...|..||.|:.|            |....|..|        ...|          |||:|: |.
Human   438 VNISVSSSKGAFLYEPCGVSTPVLSTGVLRSNGGCSIVGTGELYVPCEPQGLLSCGSGRKSSMTL 502

  Fly   445 GISGSS 450
            |..|||
Human   503 GAGGSS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 95/379 (25%)
PRK13922 154..>221 CDD:473155 17/70 (24%)
LTD 474..574 CDD:460003
KRT82NP_149022.3 Head 1..120 10/65 (15%)
Keratin_2_head <61..116 CDD:465068 8/54 (15%)
Filament 120..430 CDD:459643 95/378 (25%)
Coil 1A 121..155 13/33 (39%)
Linker 1 156..165 2/9 (22%)
Coil 1B 166..266 28/145 (19%)
Linker 12 267..283 1/15 (7%)
Coil 2 284..427 45/164 (27%)
Tail 428..513 24/83 (29%)
Blue background indicates that the domain is not in the aligned region.

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