DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT31

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_002268.2 Gene:KRT31 / 3881 HGNCID:6448 Length:416 Species:Homo sapiens


Alignment Length:389 Identity:110/389 - (28%)
Similarity:173/389 - (44%) Gaps:87/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDE- 109
            |||.:|.||||||.|::::|.||.:|:.|.   ||.::...::...|...|:.......:|..: 
Human    56 EKETMQFLNDRLASYLEKVRQLERDNAELE---NLIRERSQQQEPLLCPSYQSYFKTIEELQQKI 117

  Fly   110 --TAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKK 172
              |..|.|:|.:.|                         :||:|..:.:..   ||...|:.|:.
Human   118 LCTKSENARLVVQI-------------------------DNAKLAADDFRT---KYQTELSLRQL 154

  Fly   173 FEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRR 237
            .|.       :...|||.||:|       ||.:.|||.|.:||:|||......|.||:...|   
Human   155 VES-------DINGLRRILDEL-------TLCKSDLEAQVESLKEELLCLKSNHEQEVNTLR--- 202

  Fly   238 QIEISEIDGRLSRQYEA----KLQQSLQELRDQYEGQMRINREEIELLYDNEIQNL-KAAANRAA 297
                .::..||:.:.:|    .|.:.|.|.|.|||..:..||.|:|..:..:.:.| |...:.:.
Human   203 ----CQLGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNRREVEQWFTTQTEELNKQVVSSSE 263

  Fly   298 QGSALATEEVRLMRTKIDGLNAKLQ---NLEDTNAGLNARIRELENLLDTERQRHN-------QY 352
            |..:...|.:.|.|| ::.|..:||   ||.|:          |||.|.....|::       ..
Human   264 QLQSYQAEIIELRRT-VNALEIELQAQHNLRDS----------LENTLTESEARYSSQLSQVQSL 317

  Fly   353 IASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRP--TTDS 414
            |.::|::|..:|.::..|.||||.|:|::..|:.||..|..||..|:..|    |..|  ||::
Human   318 ITNVESQLAEIRSDLERQNQEYQVLLDVRARLECEINTYRSLLESEDCNL----PSNPCATTNA 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 105/372 (28%)
PRK13922 154..>221 CDD:473155 22/66 (33%)
LTD 474..574 CDD:460003
KRT31NP_002268.2 Head 1..56 110/389 (28%)
Filament 55..366 CDD:459643 105/372 (28%)
Coil 1A 57..91 17/36 (47%)
Linker 1 92..102 1/9 (11%)
Coil 1B 103..203 36/148 (24%)
Linker 12 204..219 3/14 (21%)
Coil 2 220..363 46/153 (30%)
Tail 364..416 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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