DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT14

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_000517.3 Gene:KRT14 / 3861 HGNCID:6416 Length:472 Species:Homo sapiens


Alignment Length:415 Identity:127/415 - (30%)
Similarity:195/415 - (46%) Gaps:96/415 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRE-TSNLK--AVYEKELAAAR-KL 106
            ||..:|:||||||.|:|::|.||..|:.|..::   :|...|: .:.:|  :.|.|.:...| |:
Human   115 EKVTMQNLNDRLASYLDKVRALEEANADLEVKI---RDWYQRQRPAEIKDYSPYFKTIEDLRNKI 176

  Fly   107 LDETA-KEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADR 170
            |..|. .....|:||..||..:        |.:||..|  |.|.|:....  ::||         
Human   177 LTATVDNANVLLQIDNARLAAD--------DFRTKYET--ELNLRMSVEA--DING--------- 220

  Fly   171 KKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRS 235
                            |||.||:|       ||||.|||.|.:||:||||:..:.|.:|:...| 
Human   221 ----------------LRRVLDEL-------TLARADLEMQIESLKEELAYLKKNHEEEMNALR- 261

  Fly   236 RRQIEISEIDGRLSRQYEA----KLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRA 296
                  .::.|.::.:.:|    .|.:.|.|:|||||.....||::.|..:..:.:.|    ||.
Human   262 ------GQVGGDVNVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEEWFFTKTEEL----NRE 316

  Fly   297 AQGSALATEEVRLMRTKIDGLNAKLQNLE-DTNAGLNARIRELENLLDTERQRH-------NQYI 353
            .   |..:|.|:..:::|..|...:|||| :..:.|:.: ..|||.|:..:.|:       .:.|
Human   317 V---ATNSELVQSGKSEISELRRTMQNLEIELQSQLSMK-ASLENSLEETKGRYCMQLAQIQEMI 377

  Fly   354 ASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISS 418
            .|:|.:|.::|.||..|.|||:.|:|:|..|:.|||.|.:||.||:..|               |
Human   378 GSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIATYRRLLEGEDAHL---------------S 427

  Fly   419 NGSHLTASASSRSGRVTPSGRRSAT 443
            :....:.|.|||.  ||.|.|:..|
Human   428 SSQFSSGSQSSRD--VTSSSRQIRT 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 116/371 (31%)
PRK13922 154..>221 CDD:473155 21/66 (32%)
LTD 474..574 CDD:460003
KRT14NP_000517.3 Head 1..114
Filament 114..425 CDD:459643 116/371 (31%)
Coil 1A 115..150 16/37 (43%)
Linker 1 151..168 3/16 (19%)
Coil 1B 169..260 40/134 (30%)
Linker 12 261..283 4/28 (14%)
Coil 2 284..422 49/145 (34%)
Tail 423..472 11/45 (24%)
Interaction with Type I keratins and keratin filaments 425..472 11/43 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..472 11/42 (26%)
Blue background indicates that the domain is not in the aligned region.

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