DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LamC and KRT10

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001366295.1 Gene:KRT10 / 3858 HGNCID:6413 Length:624 Species:Homo sapiens


Alignment Length:421 Identity:114/421 - (27%)
Similarity:186/421 - (44%) Gaps:63/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDET 110
            ||..:|:||||||.|:|::|.||..|..|              ...:|..|||.        ..:
Human   146 EKVTMQNLNDRLASYLDKVRALEESNYEL--------------EGKIKEWYEKH--------GNS 188

  Fly   111 AKEKAKLEIDIKRLWEENDDLKPR-LDKKTKEATV--AENNARLYENRYNEVNGKYNQSLADRKK 172
            .:.:.:   |..:.::..||||.: |:..|..|.:  ..:||||..:.:             |.|
Human   189 HQGEPR---DYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDF-------------RLK 237

  Fly   173 FEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRR 237
            :|:   |:|| .:.:...::.||:.|:..||.:.|||.|.:||.||||:..:.|.:|:.:.|:  
Human   238 YEN---EVAL-RQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRN-- 296

  Fly   238 QIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSAL 302
             :...:::..::......|.|.|..:|.|||.....||::.|..::.:.:.|....:...:..:.
Human   297 -VSTGDVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISS 360

  Fly   303 ATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEM 367
            ...|:..:|..:..|..:||:.......|.|.:.|.|.....:..:....|::||.:||::|.|.
Human   361 YKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAET 425

  Fly   368 AHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGR----------PTTDSGISSNGSH 422
            ..|..|||.|:|||:.|:.||..|..||.||.   :....||          ..:..|.||.|.|
Human   426 ECQNTEYQQLLDIKIRLENEIQTYRSLLEGEG---SSGGGGRGGGSFGGGYGGGSSGGGSSGGGH 487

  Fly   423 LTASASSRSGRV--TPSGRRSATPGISGSSA 451
            ......|..|..  ..||..|:..|..|.|:
Human   488 GGGHGGSSGGGYGGGSSGGGSSGGGYGGGSS 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 99/357 (28%)
PRK13922 154..>221 CDD:473155 20/66 (30%)
LTD 474..574 CDD:460003
KRT10NP_001366295.1 Head 1..145
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Filament 145..454 CDD:459643 96/352 (27%)
Coil 1A 146..181 17/48 (35%)
Linker 1 182..202 4/30 (13%)
Coil 1B 203..294 34/107 (32%)
Linker 12 295..317 2/24 (8%)
Coil 2 318..456 39/137 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.