DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT8

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001243211.1 Gene:KRT8 / 3856 HGNCID:6446 Length:511 Species:Homo sapiens


Alignment Length:507 Identity:136/507 - (26%)
Similarity:228/507 - (44%) Gaps:113/507 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SRASTSTPVGGASTS--SRVGAT--------------------------SPTSP--------TRT 41
            ||:.||.|....|:|  ||||::                          |..||        .:.
Human    50 SRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQA 114

  Fly    42 SRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKL 106
            .|.||||:::.||::.|.:||::|.||.:|..|..:.:|.|.. ....||:..::|..:...|:.
Human   115 VRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQ-KTARSNMDNMFESYINNLRRQ 178

  Fly   107 LDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRY-NEVNGKYNQSLADR 170
            |:...:||.|||.::..:....:|.|                     |:| :|:|          
Human   179 LETLGQEKLKLEAELGNMQGLVEDFK---------------------NKYEDEIN---------- 212

  Fly   171 KKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRS 235
                   |...:|||.:.     ::|.::...:.:|:||::.:.|.:|:.|..|::.:|:.|.:|
Human   213 -------KRTEMENEFVL-----IKKDVDEAYMNKVELESRLEGLTDEINFLRQLYEEEIRELQS 265

  Fly   236 RRQIEISEIDGRLSRQYEAKLQQS--LQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQ 298
                :||:....||......|...  :.|::.|||.....:|.|.|.:|..:.:.|::.|.:...
Human   266 ----QISDTSVVLSMDNSRSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGD 326

  Fly   299 GSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRM 363
            .......|:..|...|..|.|:::.|:...|.|.|.|.:.|...:...:..|..::.|||.|||.
Human   327 DLRRTKTEISEMNRNISRLQAEIEGLKGQRASLEAAIADAEQRGELAIKDANAKLSELEAALQRA 391

  Fly   364 RDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTASAS 428
            :.:||.||:|||.||::|::||:|||.|.|||.|||.||          :||:.:...| |.:.|
Human   392 KQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRL----------ESGMQNMSIH-TKTTS 445

  Fly   429 SRSGRVTPSGRRSATPGIS-----------GSSAVKR----RRTVIDESEDR 465
            ..:|.::.:.....:||:|           |||:..|    |..|:.:.|.|
Human   446 GYAGGLSSAYGGLTSPGLSYSLGSSFGSGAGSSSFSRTSSSRAVVVKKIETR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 102/358 (28%)
PRK13922 154..>221 CDD:473155 14/67 (21%)
LTD 474..574 CDD:460003
KRT8NP_001243211.1 Keratin_2_head <91..115 CDD:465068 3/23 (13%)
Filament 118..429 CDD:459643 102/358 (28%)
Blue background indicates that the domain is not in the aligned region.

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