DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT79

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_787028.1 Gene:KRT79 / 338785 HGNCID:28930 Length:535 Species:Homo sapiens


Alignment Length:460 Identity:113/460 - (24%)
Similarity:207/460 - (45%) Gaps:101/460 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDT-----VNRETSNLKAVYEKELAA 102
            |.||:|:::.||::.|.:||::|.||.:|..|..:..|.|:.     |.|  :||:.::|..|.:
Human   139 RTQEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQGQNLGVTR--NNLEPLFEAYLGS 201

  Fly   103 ARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRY-NEVNGKYNQS 166
            .|..||....|:.:|:.:::.:.:..:|.|                     |:| :|:|      
Human   202 MRSTLDRLQSERGRLDSELRNVQDLVEDFK---------------------NKYEDEIN------ 239

  Fly   167 LADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELT 231
                       |..|.|||.:     .|:|.::|..:.|:||..:..:|.:|:.|..|::..||:
Human   240 -----------KHTAAENEFV-----VLKKDVDAAYMGRMDLHGKVGTLTQEIDFLQQLYEMELS 288

  Fly   232 ETR-------------SRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYD 283
            :.:             :.|.:::..|...:..|||...|:|..|....|:.:.    ||:::...
Human   289 QVQTHVSNTNVVLSMDNNRNLDLDSIIAEVKAQYELIAQRSRAEAEAWYQTKY----EELQVTAG 349

  Fly   284 NEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQR 348
            ....||:...|..|:    .|..::.::.:.|....:.|.|:...|....| .||. |.|.::: 
Human   350 KHGDNLRDTKNEIAE----LTRTIQRLQGEADAAKKQCQQLQTAIAEAEQR-GELA-LKDAQKK- 407

  Fly   349 HNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTD 413
                :..|:..|.:.::::...|::||.||::|::||:|||.|.|||..||.|::.|.|...:  
Human   408 ----LGDLDVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLLESEESRMSGECPSAVS-- 466

  Fly   414 SGISSNGSHLT---ASASSRSGRVTPSGRRSATPG---------------ISGSSAVKRRRTVID 460
              ||..|:..|   ..|:|..|.::..|...||.|               :|..:::.|:.|.:.
Human   467 --ISVTGNSTTVCGGGAASFGGGISLGGSGGATKGGFSTNVGYSTVKGGPVSAGTSILRKTTTVK 529

  Fly   461 ESEDR 465
            .|..|
Human   530 TSSQR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 93/374 (25%)
PRK13922 154..>221 CDD:473155 17/67 (25%)
LTD 474..574 CDD:460003
KRT79NP_787028.1 Head 1..141 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Keratin_2_head 30..138 CDD:465068
Filament 141..456 CDD:459643 93/374 (25%)
Coil 1A 142..177 12/34 (35%)
Linker 1 178..198 6/21 (29%)
Coil 1B 199..290 29/133 (22%)
Linker 12 291..314 1/22 (5%)
Coil 2 315..453 40/152 (26%)
Tail 454..535 20/85 (24%)
Blue background indicates that the domain is not in the aligned region.

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