| Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_571448.2 | Gene: | gfap / 30646 | ZFINID: | ZDB-GENE-990914-3 | Length: | 444 | Species: | Danio rerio |
| Alignment Length: | 474 | Identity: | 137/474 - (28%) |
|---|---|---|---|
| Similarity: | 222/474 - (46%) | Gaps: | 85/474 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SARRVTLNTRVSRASTSTPVGGASTSSRVGA--------TSPTSPTRTSRQQEKEELQHLNDRLA 58
Fly 59 CYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKR 123
Fly 124 LWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLR 188
Fly 189 RQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGRLSRQYE 253
Fly 254 AKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLN 318
Fly 319 AKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVS 383
Fly 384 LDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTASASSRSGRVTPSGRRSATPGISG 448
Fly 449 SSAVKRR---RTVIDESED 464 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 112/355 (32%) |
| ATP-synt_B | <67..>142 | CDD:304375 | 26/74 (35%) | ||
| MreC | <178..>224 | CDD:302802 | 10/45 (22%) | ||
| LTD | 473..574 | CDD:279300 | |||
| gfap | NP_571448.2 | Head | 1..84 | 12/54 (22%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..47 | 6/17 (35%) | |||
| Filament_head | 5..79 | CDD:282575 | 9/49 (18%) | ||
| Filament | 80..388 | CDD:278467 | 112/355 (32%) | ||
| Coil 1A | 85..116 | 15/30 (50%) | |||
| Linker 1 | 117..127 | 3/12 (25%) | |||
| Coil 1B | 128..226 | 34/139 (24%) | |||
| Linker 12 | 227..242 | 2/17 (12%) | |||
| Coil 2A | 243..264 | 7/20 (35%) | |||
| Linker 2 | 265..268 | 1/2 (50%) | |||
| Coil 2B | 269..389 | 46/119 (39%) | |||
| Tail | 390..444 | 14/65 (22%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||