Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446428.1 | Gene: | Krt18 / 294853 | RGDID: | 619935 | Length: | 423 | Species: | Rattus norvegicus |
Alignment Length: | 442 | Identity: | 119/442 - (26%) |
---|---|---|---|
Similarity: | 193/442 - (43%) | Gaps: | 95/442 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SRASTSTPVGGASTSSR----VGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSR 73
Fly 74 LTQELNLAQDTVNRETSNLK--AVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLD 136
Fly 137 KKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAE 201
Fly 202 TLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIEIS----EIDGRLSRQYEAKLQQSLQE 262
Fly 263 LRDQYEGQMRINREEIELLYDNEIQ------NLKAAANRAAQGSALATEEVRLMRTKIDGLNAKL 321
Fly 322 QNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDL 386
Fly 387 EIAAYDKLL-CGEERRLNIESPGRPTTDSGISSNGSHLTASASSR---SGRV 434 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 100/368 (27%) |
ATP-synt_B | <67..>142 | CDD:304375 | 13/76 (17%) | ||
MreC | <178..>224 | CDD:302802 | 11/45 (24%) | ||
LTD | 473..574 | CDD:279300 | |||
Krt18 | NP_446428.1 | Head. /evidence=ECO:0000255 | 2..71 | 9/35 (26%) | |
Necessary for interaction with PNN. /evidence=ECO:0000250|UniProtKB:P05783 | 62..366 | 94/369 (25%) | |||
Interaction with TRADD. /evidence=ECO:0000250|UniProtKB:P05783 | 69..121 | 22/63 (35%) | |||
Filament | 72..378 | CDD:278467 | 98/361 (27%) | ||
Coil 1A. /evidence=ECO:0000255 | 72..107 | 20/36 (56%) | |||
Linker 1. /evidence=ECO:0000255 | 108..125 | 2/16 (13%) | |||
Coil 1B. /evidence=ECO:0000255 | 126..217 | 26/132 (20%) | |||
Linker 12. /evidence=ECO:0000255 | 218..241 | 7/28 (25%) | |||
Interaction with DNAJB6. /evidence=ECO:0000250|UniProtKB:P05783 | 236..384 | 45/157 (29%) | |||
Coil 2. /evidence=ECO:0000255 | 242..380 | 43/143 (30%) | |||
Tail. /evidence=ECO:0000255 | 381..423 | 9/40 (23%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |