Protein Alignment LamC and Ina

DIOPT Version :9

• Sequence 1: NP_001260974.1
• Gene: LamC / 36615
• FlyBaseID: FBgn0010397
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_062001.2
• Gene: Ina / 24503
• RGDID: 2911
• Length: 506
• Species: Rattus norvegicus
• Alignment Length: 513
• Identity: 138/513 - (26%)
• Similarity: 232/513 - (45%)
• Gaps: 98/513 - (19%)

  Fly    10 TRVSRASTSTPVGGASTSSRVG------------------ATSPTSPTRTSRQQEKEELQHLNDR 56
            :|.:.|||:    ..|::|.:|                  |.:.|:..:..|..|||:||.||||
  Rat    44 SRSNVASTA----ACSSASSLGLGLAYRRLPASDGLDLSQAAARTNEYKIIRTNEKEQLQGLNDR 104

  Fly    57 LACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDI 121
            .|.:|:::..||.:|..|..||...:.. :.|.|.:..::::||...|..|:|.:..:|:..::.
  Rat   105 FAVFIEKVHQLETQNRALEAELAALRQR-HAEPSRVGELFQRELRELRAQLEEASSARAQALLER 168

  Fly   122 KRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENER 186
            ..|.||...|:.|.:::::....||
  Rat   169 DGLAEEVQRLRARCEEESRGREGAE---------------------------------------- 193

  Fly   187 LRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIE---ISEIDGRL 248
              |.|...::.::..||||:|||.:.:||.:||||..|||.:|:.|..:..|..   .:|:|..:
  Rat   194 --RALKAQQRDVDGATLARLDLEKKVESLLDELAFVRQVHDEEVAELLATLQASSQAAAEVDVAV 256

  Fly   249 SRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTK 313
            ::   ..|..:|:|:|.|||.....|.:..|..|.::..||...|.|:.:....:.||:...|.:
  Rat   257 AK---PDLTSALREIRAQYESLAAKNLQSAEEWYKSKFANLNEQAARSTEAIRASREEIHEYRRQ 318

  Fly   314 IDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLM 378
            :.....:::.|...|..|..:|.|||.....|...:...|..||::|:..:.|||..|:|||.|:
  Rat   319 LQARTIEIEGLRGANESLERQILELEERHSAEVAGYQDSIGQLESDLRNTKSEMARHLREYQDLL 383

  Fly   379 DIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNG-------SHLTAS--ASSRSGRV 434
            ::|::||:|||||.|||.|||.|.         :.||:|.:|       |:|...  .||.:.:|
  Rat   384 NVKMALDIEIAAYRKLLEGEETRF---------STSGLSISGLNPLPNPSYLLPPRILSSTTSKV 439

  Fly   435 TPSG--------RRSATPGISGSSAVKRRRTVIDESEDRTLSEYSVNAAAKGDLEIIE 484
            :.:|        ..........|..|.::.:.:.||.:.||.| :|.:..|.:...||
  Rat   440 SSAGLSLKKEEEEEEEEEEEGASKEVTKKTSKVGESFEETLEE-TVVSTKKTEKSTIE 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LamC	NP_001260974.1	Filament	45..401	CDD:278467	106/358 (30%)
		ATP-synt_B	<67..>142	CDD:304375	19/74 (26%)
		MreC	<178..>224	CDD:302802	15/45 (33%)
		LTD	473..574	CDD:279300	3/12 (25%)
Ina	NP_062001.2	Head	1..87		9/46 (20%)
		Filament_head	10..92	CDD:282575	9/51 (18%)
		Coil 1A	88..129		18/40 (45%)
		Filament	93..406	CDD:278467	106/358 (30%)
		Linker 1	130..142		2/12 (17%)
		Coil 1B	143..238		32/136 (24%)
		Linker 2	239..262		3/25 (12%)
		Coil 2	263..408		51/153 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910