DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and Krt73

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_997650.1 Gene:Krt73 / 223915 MGIID:3607712 Length:539 Species:Mus musculus


Alignment Length:507 Identity:119/507 - (23%)
Similarity:217/507 - (42%) Gaps:120/507 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SARRVTLNTRVSRASTSTPVGG-----------ASTSSRVGATSPTSPT---------------- 39
            |.|.::.|.    ||:|...||           |.:....||..|::|:                
Mouse    52 SPRSISFNV----ASSSGRTGGYGFGRNRASGFAGSMFGSGALGPSNPSLCLPGGIHQVTVNKSL 112

  Fly    40 ------------RTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQD-TVNRETSN 91
                        :..|.||:|:::.||::.|.:||::|.||.:|..|..:..|.|. .::....|
Mouse   113 LAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLQTKWELLQQLDLSNCRRN 177

  Fly    92 LKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRY 156
            |:.|||..:::.:|.||..:.::.:|:.:::.:.:..:|.|.|.:::..:.|.|||         
Mouse   178 LEPVYEAHISSLQKQLDSLSGDRVRLDSELRGMRDAVEDCKKRYEEEINKRTTAEN--------- 233

  Fly   157 NEVNGKYNQSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAF 221
                                  |..:           |:|.::|..:::|:|:.:..:|..|:.|
Mouse   234 ----------------------EFVV-----------LKKDVDAAYMSKVELQAKVDALDGEIKF 265

  Fly   222 KDQVHTQELTETRSRRQIEISEIDGRLS--RQYEAKLQQSLQELRDQYEGQMRINREEIELLYDN 284
            ...::..|:|:.:|    .||:....||  ......|...:.|:|.|||.....::.|.|::|..
Mouse   266 LKCLYEGEITQMQS----HISDTSVVLSMDNNRNLDLDSIIAEVRAQYEDIALKSKAEAEMVYQT 326

  Fly   285 EIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRH 349
            :.|.|:.||.|..........|:..:...|..|.:::::::...:.|...|.:.|...|...:..
Mouse   327 KFQELQLAAGRHGDDLKHTRNEISELTRLIQRLRSEIESVKKQCSNLETAIADAEQRGDCALKDA 391

  Fly   350 NQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIE--------- 405
            ...:..||..|.:.::|:|..|:|:|.||.:|::||:|||.|.|||.|||.|::.|         
Mouse   392 RAKLDELERALHQAKEELARMLREHQELMSMKLALDIEIATYRKLLEGEECRMSGEHTSAVSISV 456

  Fly   406 ----SPGR--PTTDSGISSNGSH-------------LTASASSRSGRVTPSG 438
                :||.  ..|..|.||.|::             |:....:.||..:|.|
Mouse   457 ISSSAPGTVGAGTSFGFSSAGTYGYRQSSVAGGYGILSGGCVTGSGNCSPRG 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 91/358 (25%)
PRK13922 154..>221 CDD:473155 8/66 (12%)
LTD 474..574 CDD:460003
Krt73NP_997650.1 Head 1..130 14/81 (17%)
Keratin_2_head 15..127 CDD:465068 13/78 (17%)
Filament 130..443 CDD:459643 91/358 (25%)
Coil 1A 131..166 12/34 (35%)
Linker 1 167..185 6/17 (35%)
Coil 1B 186..277 22/132 (17%)
Linker 12 278..301 6/26 (23%)
Coil 2 302..440 40/137 (29%)
Tail 441..539 15/68 (22%)
Blue background indicates that the domain is not in the aligned region.

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