Sequence 1: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_694504.2 | Gene: | lmnb1 / 195816 | ZFINID: | ZDB-GENE-020424-2 | Length: | 588 | Species: | Danio rerio |
Alignment Length: | 574 | Identity: | 207/574 - (36%) |
---|---|---|---|
Similarity: | 335/574 - (58%) | Gaps: | 32/574 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 ASTSTPVGGASTSSRVGATSPTSPTRTSRQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELN 79
Fly 80 LAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKEATV 144
Fly 145 AENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLE 209
Fly 210 NQNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRIN 274
Fly 275 REEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELE 339
Fly 340 NLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI 404
Fly 405 ESPGRPTTDSGISSNGSHLTAS--ASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDESEDRTL 467
Fly 468 SEYSVNAAAKGDLEIIEADVEGRFIKLHNKGTEEINLTGWQLTRIAGDEELAFKFSRGSKVLGGA 532
Fly 533 SVTIWSVDAGTAHDPPNNLVMKKK--WPVANSMR-SVLANADKEVRVLS-IYNT 582 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 137/355 (39%) |
ATP-synt_B | <67..>142 | CDD:304375 | 31/74 (42%) | ||
MreC | <178..>224 | CDD:302802 | 22/45 (49%) | ||
LTD | 473..574 | CDD:279300 | 35/103 (34%) | ||
lmnb1 | NP_694504.2 | Filament | 32..388 | CDD:278467 | 137/355 (39%) |
LTD | 436..544 | CDD:279300 | 37/107 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 268 | 1.000 | Domainoid score | I1815 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 393 | 1.000 | Inparanoid score | I1927 |
OMA | 1 | 1.010 | - | - | QHG48052 | |
OrthoDB | 1 | 1.010 | - | - | D204815at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6402 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
Panther | 1 | 1.100 | - | - | O | PTHR45721 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X632 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.980 |