DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT24

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_061889.2 Gene:KRT24 / 192666 HGNCID:18527 Length:525 Species:Homo sapiens


Alignment Length:460 Identity:121/460 - (26%)
Similarity:202/460 - (43%) Gaps:108/460 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEK------ELAAAR 104
            ||:.:|:||||||.|:|::|.||..|:.|              .:.:|..|:|      :..:.|
Human   140 EKQTMQNLNDRLANYLDKVRALEEANTDL--------------ENKIKEWYDKYGPGSGDGGSGR 190

  Fly   105 KLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKTKE---ATVAENNARLYENRYNEVNGKYNQS 166
                           |..:.:...:||:.::...|.|   ..:..:||||..:.:          
Human   191 ---------------DYSKYYSIIEDLRNQIIAATVENAGIILHIDNARLAADDF---------- 230

  Fly   167 LADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELT 231
               |.|:|:   ||.| .:.:...::.|||.|:..|:.|.|||.|.:|..||||:..:.|.:|:.
Human   231 ---RLKYEN---ELCL-RQSVEADINGLRKVLDDLTMTRSDLEMQIESFTEELAYLRKNHEEEMK 288

  Fly   232 ETRSRR----QIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAA 292
            ..:...    .:|::...|       ..|.:.|.::|.|||.....||.|.|..::.:..:|:|.
Human   289 NMQGSSGGEVTVEMNAAPG-------TDLTKLLNDMRAQYEELAEQNRREAEERFNKQSASLQAQ 346

  Fly   293 ANRAAQGSALATEEVRLMRTKIDGLNAKLQN-----------LEDTNAGLNARIRELENLLDTER 346
            .:..|..:..|..|:..::..:..|..:||:           |.||.||..|::.|::.      
Human   347 ISTDAGAATSAKNEITELKRTLQALEIELQSQLAMKSSLEGTLADTEAGYVAQLSEIQT------ 405

  Fly   347 QRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNI-ESPGRP 410
                 .|::||.|:.::..|...|..||:.|:|||..|::||..|.:||.||....:. |..|| 
Human   406 -----QISALEEEICQIWGETKCQNAEYKQLLDIKTRLEVEIETYRRLLDGEGGGSSFAEFGGR- 464

  Fly   411 TTDSGISSNGSHLTASASSRSGRVTPSGRRSATPGISGSSAVKRRRTVIDE--------SEDRTL 467
              :||..:.||....|..||||..:..||        .||..:..:|:::|        |:..::
Human   465 --NSGSVNMGSRDLVSGDSRSGSCSGQGR--------DSSKTRVTKTIVEELVDGKVVSSQVSSI 519

  Fly   468 SEYSV 472
            ||..|
Human   520 SEVKV 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 99/378 (26%)
PRK13922 154..>221 CDD:473155 20/66 (30%)
LTD 474..574 CDD:460003
KRT24NP_061889.2 Coil 1A 140..175 17/48 (35%)
Linker 1 176..198 4/36 (11%)
Coil 1B 199..290 31/107 (29%)
Linker 12 291..313 3/28 (11%)
Coil 2 314..452 42/148 (28%)
Tail 453..525 22/83 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..497 16/48 (33%)
Head 1..139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Filament 140..452 CDD:459643 97/375 (26%)
Blue background indicates that the domain is not in the aligned region.

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