Protein Alignment LamC and ifa-3

DIOPT Version :9

• Sequence 1: NP_001260974.1
• Gene: LamC / 36615
• FlyBaseID: FBgn0010397
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_510649.3
• Gene: ifa-3 / 181699
• WormBaseID: WBGene00002051
• Length: 581
• Species: Caenorhabditis elegans
• Alignment Length: 606
• Identity: 156/606 - (25%)
• Similarity: 277/606 - (45%)
• Gaps: 91/606 - (15%)

  Fly     4 RRVTLNTRVSRASTSTPVGG---------ASTSSRVGATSP-----TSPTRTSRQQEKEELQHLN 54
            |.||.:|:    :..||..|         ..|||.....||     .|..|..|::||:|:..||
 Worm    19 RTVTSSTQ----NYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTIRDDREREKKEITELN 79

  Fly    55 DRLACYIDRMRNLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEI 119
            ||||.||.::|.|..:|.:|..:||:.|....:.|.::|.:||.|:..|..::.||.|:..:.|.
 Worm    80 DRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNVVKETGKDHEEAEK 144

  Fly   120 DIKRLWEENDDLKPRLDKKTKEATVAENNARLYE------NRYNEVNGKYNQSLADRK--KFEDQ 176
            :|.::.::.|:|:.:.::..|..  ||:..::.|      |...|:|      |..|:  ..|::
 Worm   145 EIGKIKDQLDELRKKFEEAQKGR--AEDRLKIDELLVTLSNLEAEIN------LLKRRIALLEEE 201

  Fly   177 AKELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQELTETRSRRQIE- 240
            ...|..||.||..:|..:|.:|:.|||.|:|.:|:..::.||:.|..:....||.:.:::...:
 Worm   202 VARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEEIDFMKRGFETELKDLQAQAARDT 266

  Fly   241 ISEIDGRLSRQY-EAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALAT 304
            .||     :|:| :.:|..|::::|.:|:..|..||.::|......:|.:....||.........
 Worm   267 TSE-----NREYFKNELMNSIRDIRAEYDRFMAGNRNDLESWSQIRVQEINTQTNRQNAEINHKR 326

  Fly   305 EEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAH 369
            :||:.:.:::..|.:|...|...|..|..::.:|...|:.:::.:...:...:|:::::|:|...
 Worm   327 DEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQLEDDQRSYEAALNDKDAQVRKLREECQA 391

  Fly   370 QLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRLNIESPGRPTTDSGISSNGSHLTASASSRSGRV 434
            .|.|.|.|:|.|.:||.|:..|.::|                                   .|..
 Worm   392 LLVELQMLLDTKQTLDGELKVYRRML-----------------------------------EGNS 421

  Fly   435 TPSGRRSATPGISGSSAVKRR------RTVIDESEDRTLSEYSVNAAAKGDLEIIEADVEGRFIK 493
            ..:|.|.....:..:||:...      |.|..|...||    |...:|||::.|.|...||:|:.
 Worm   422 EENGLRQLVEKVVRTSAINEEVDTETMRVVKGEHSSRT----SYQRSAKGNVSIKEVSPEGKFVI 482

  Fly   494 LHNKGTE-EINLTGWQLTR-IAGDEELAFKFSRGSKVLGGASVTIWSVDAGTAHDPPNNLVMK-- 554
            |.|...: |..|..|:|.| |.|..|:.|.|.....:....:|.|::...|.| :||..||.:
 Worm   483 LENTHRDKEEPLGDWKLKRKIDGKREIVFTFPSDYILHPVQTVKIFARGNGVA-NPPEVLVFEGD 546

  Fly   555 KKWPVANSMRSVLANADKEVR 575
            ..:....:::::|.|...|.|
 Worm   547 DTFGAGANVQTILYNNSGEER 567

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LamC	NP_001260974.1	Filament	45..401	CDD:278467	98/365 (27%)
		ATP-synt_B	<67..>142	CDD:304375	20/74 (27%)
		MreC	<178..>224	CDD:302802	17/45 (38%)
		LTD	473..574	CDD:279300	30/104 (29%)
ifa-3	NP_510649.3	Filament	71..419	CDD:278467	98/395 (25%)
		DUF342	<140..209	CDD:302792	15/76 (20%)
		DUF904	181..245	CDD:283624	22/69 (32%)
		LTD	462..570	CDD:279300	32/107 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	196	1.000	Domainoid score	I1825
eggNOG	1	0.900	-	-		E1_KOG0977
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H7818
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D204815at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	7	6.780