DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and KRT25

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_853512.1 Gene:KRT25 / 147183 HGNCID:30839 Length:450 Species:Homo sapiens


Alignment Length:424 Identity:111/424 - (26%)
Similarity:189/424 - (44%) Gaps:62/424 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STPVGGASTSSRVGATSPTSPTRTSRQ-----QEKEELQHLNDRLACYIDRMRNLENENSRLTQE 77
            |:..||:|:....|..:|.:....:.:     .||..:|:||||||.|:|.:..||..|:.|.|:
Human    46 SSAFGGSSSGGNTGGGNPCAGFTVNERGLLSGNEKVTMQNLNDRLASYLDSVHALEEANADLEQK 110

  Fly    78 LNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLWEENDDLKPRLDKKT--- 139
                          :|..|||....:.:.||.          |..|.:...||||.::...|   
Human   111 --------------IKGWYEKFGPGSCRGLDH----------DYSRYFPIIDDLKNQIIASTTSN 151

  Fly   140 KEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLA 204
            ..|.:..:||||..:.:             |.|:|:   |||| ::.:...::.||:.|:..||.
Human   152 ANAVLQIDNARLTADDF-------------RLKYEN---ELAL-HQSVEADVNGLRRVLDEITLC 199

  Fly   205 RVDLENQNQSLREELAFKDQVHTQELTETRSRRQIEISEIDGRLSRQYEA----KLQQSLQELRD 265
            |.|||.|.::|.||:.:..:.|.:|:       |:......|.::.:..|    .|...|..:|.
Human   200 RTDLEIQYETLSEEMTYLKKNHKEEM-------QVLQCAAGGNVNVEMNAAPGVDLTVLLNNMRA 257

  Fly   266 QYEGQMRINREEIELLYDNEIQNLKAAANRAAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAG 330
            :||.....||.:.|..::.:..:|:...:.....:..|..|:..|:..:..|..:||:|..|...
Human   258 EYEALAEQNRRDAEAWFNEKSASLQQQISEDVGATTSARNELTEMKRTLQTLEIELQSLLATKHS 322

  Fly   331 LNARIRELENLLDTERQRHNQYIASLEAELQRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLL 395
            |...:.|.|:....:..:....|.:||.:|.::|.|...|..||:.|:|||:.|:.||..|..|:
Human   323 LECSLTETESNYCAQLAQIQAQIGALEEQLHQVRTETEGQKLEYEQLLDIKLHLEKEIETYCLLI 387

  Fly   396 CGEERRLNIESPGRPTTDSGISSNGSHLTASASS 429
            .|::..  .:|.|..:.|.|..:.||.:...|.:
Human   388 GGDDGA--CKSGGYKSKDYGSGNVGSQVKDPAKA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 98/362 (27%)
PRK13922 154..>221 CDD:473155 20/66 (30%)
LTD 474..574 CDD:460003
KRT25NP_853512.1 Head. /evidence=ECO:0000255 1..78 6/31 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Filament 78..391 CDD:459643 98/360 (27%)
Coil 1A. /evidence=ECO:0000255 79..114 17/48 (35%)
Linker 1. /evidence=ECO:0000255 115..136 7/30 (23%)
Coil 1B. /evidence=ECO:0000255 137..228 33/114 (29%)
Linker 12. /evidence=ECO:0000255 229..251 3/21 (14%)
Coil 2. /evidence=ECO:0000255 252..390 37/137 (27%)
Tail. /evidence=ECO:0000255 391..450 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

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