DRSC/TRiP Functional Genomics Resources

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Protein Alignment LamC and Krt83

DIOPT Version :10

Sequence 1:NP_001260974.1 Gene:LamC / 36615 FlyBaseID:FBgn0010397 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001188252.1 Gene:Krt83 / 100126226 MGIID:3690448 Length:479 Species:Mus musculus


Alignment Length:432 Identity:109/432 - (25%)
Similarity:185/432 - (42%) Gaps:84/432 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RQQEKEELQHLNDRLACYIDRMRNLENENSRLTQELNLAQDTVNRE--TSNLKAVYEKELAAARK 105
            :.:|||:::.||.|.|.:||::|.||.:|..|..:....|   ||:  .||::.::|..:     
Mouse   101 KHEEKEQIKCLNSRFAAFIDKVRFLEQQNKLLETKWQFYQ---NRKCCESNMEPLFEGYI----- 157

  Fly   106 LLDETAKEKAK-LEIDIKRLWEENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLAD 169
               ||.:.:|: :|.|..||              ..|...|:.:...|:.||.|           
Mouse   158 ---ETLRREAECVEADSGRL--------------AAELNHAQESMEGYKKRYEE----------- 194

  Fly   170 RKKFEDQAKELAL----ENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQVHTQEL 230
                     |:||    |||.:.     |:|.::...|.:.|||...::|.:|..|..:::.:|.
Mouse   195 ---------EVALRATAENEFVA-----LKKDVDCAYLRKSDLEANAEALTQETDFLRRMYDEET 245

  Fly   231 TETRSRRQIEISEIDGRLSRQYEAKLQQSLQELRDQYEGQMRINREEIELLYDNEIQNLKAAANR 295
            ....|  .|..:.:..::....:..:...:.|::.||:.....:|.|.|..|..:.:.:||...|
Mouse   246 RILHS--HISDTSVIVKMDNSRDLNMDCVVAEIKAQYDDIASRSRAEAESWYRTKCEEMKATVIR 308

  Fly   296 AAQGSALATEEVRLMRTKIDGLNAKLQNLEDTNAGLNARIRELENLLDTERQRHNQYIASLEAEL 360
            ..:......||:..:...|..|.|:::|.:..|..|.|.:.:.|...:.........:|.||..|
Mouse   309 HGETLRRTREEINELNRMIQRLTAEIENAKCQNTKLEAAVTQSEQQGEAALADARCKLAELEGAL 373

  Fly   361 QRMRDEMAHQLQEYQGLMDIKVSLDLEIAAYDKLLCGEERRL-------NI-------------- 404
            |:.:.:||..|:|||.:|:.|:.||:||..|.:||.|||:||       |:              
Mouse   374 QKAKQDMACLLKEYQEVMNSKLGLDVEIITYRRLLEGEEQRLCEGVGAVNVCVSSSRGGVVCGDL 438

  Fly   405 -ESPGRPTTDSGISSNGSHLTASASSRSGRVTPSGRRSATPG 445
             .|..||.|.|..|:..|   .:.:..:|...|.|.....||
Mouse   439 CVSGSRPVTGSVCSAPCS---GNVAVSTGLCAPCGSGPCHPG 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LamCNP_001260974.1 Filament 45..401 CDD:459643 94/362 (26%)
PRK13922 154..>221 CDD:473155 17/70 (24%)
LTD 474..574 CDD:460003
Krt83NP_001188252.1 Keratin_2_head <38..100 CDD:465068
Filament 103..414 CDD:459643 94/362 (26%)
Blue background indicates that the domain is not in the aligned region.

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