DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ttv and AT4G13990

DIOPT Version :9

Sequence 1:	NP_001356963.1	Gene:	ttv / 36614	FlyBaseID:	FBgn0265974	Length:	772	Species:	Drosophila melanogaster
Sequence 2:	NP_001319928.1	Gene:	AT4G13990 / 827035	AraportID:	AT4G13990	Length:	521	Species:	Arabidopsis thaliana

Alignment Length:	396	Identity:	89/396 - (22%)
Similarity:	140/396 - (35%)	Gaps:	115/396 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    91 METCFDFTRCYDRFLV-YIYPPEPLNSLGAAPPTSANYQKILTAIQES----------------- 137
            ::.||..||..::.:. ||      .:.|.. |...||:.:|  :::|
plant   114 LDNCFKITRGTEKDICPYI------ENYGFG-PVIKNYENVL--LKQSWFTTNQFMLEVIFHNKM 169

  Fly   138 ---RYYTSDPT-AACLFV------------LGIDTLDRDSLSEDYVRNVPSRLARLPYWN--NGR 184
               |..|:|.: |:.:||            .|.:...|||.|.:.:    ..|.....|.  :||
plant   170 INYRCLTNDSSLASAVFVPFYAGLDMSRYLWGFNITVRDSSSHELM----DWLVVQKEWGRMSGR 230

  Fly   185 NHIIFNLYSG--TWPDYAENSLGFDAGEAIL---AKASMGVLQLRHGF---DVSIP---LFHKQF 238
            :|.   |.||  .|....:.....|.|..:.   ...:|.:|.:....   |.:||   .||.:
plant   231 DHF---LVSGRIAWDFRRQTDNESDWGSKLRFLPESRNMSMLSIESSSWKNDYAIPYPTCFHPR- 291

  Fly   239 PLRAGATGTVQSNNFPANKK--YLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVLVTTCRHGKSW 301
                .....|:......::|  ||..|.|     ....|.::|:    .|:   ::..|...|..
plant   292 ----SVDEIVEWQELMRSRKREYLFTFAG-----APRPEYKDSV----RGK---IIDECLESKKQ 340

  Fly   302 RELQDNRCDEDNREYDR-YDYETLLQNSTFCLVPRGRRLGSFRFLEALQAGCIPVLL-------S 358
            ..|.|  |:..|...|. .:...:.:||.|||.|.|.........:::.||||||..       .
plant   341 CYLLD--CNYGNVNCDNPVNVMKVFRNSVFCLQPPGDSYTRRSMFDSILAGCIPVFFHPGTAYAQ 403

  Fly   359 NAWVLP--------FESKIDWKQAAIWADERLLLQVPDIVRSIPAERIFALRQQTQVLWERYFGS 415
            ..|.||        :....|.|:..|...|||:        .||.||:..||::...|
plant   404 YKWHLPKNHSSYSVYLPVKDVKEWNIKIKERLI--------EIPEERVVRLREEVIRL------- 453

  Fly   416 IEKIVF 421
            |.|:|:
plant   454 IPKVVY 459

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ttv	NP_001356963.1	Exostosin	102..393	CDD:335188	75/355 (21%)
ttv	NP_001356963.1	Glyco_transf_64	477..737	CDD:337333
AT4G13990	NP_001319928.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1021
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D789556at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910