DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttv and ext2

DIOPT Version :10

Sequence 1:NP_001356963.1 Gene:ttv / 36614 FlyBaseID:FBgn0265974 Length:772 Species:Drosophila melanogaster
Sequence 2:NP_001120887.1 Gene:ext2 / 100151709 XenbaseID:XB-GENE-867542 Length:718 Species:Xenopus tropicalis


Alignment Length:712 Identity:248/712 - (34%)
Similarity:366/712 - (51%) Gaps:119/712 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 CRMETCFDFTRC----YDRFLVYIYP-----PEPLNSLGAAPPTSANYQKILTAIQESRYYTSDP 144
            |||.||||..||    .::..|||||     .|...|:|..  .|..|.::|:|:.:|.:||.|.
 Frog    85 CRMHTCFDVYRCGFNPKNKVKVYIYPLKKYTDEYDGSVGGT--ISREYNQLLSAVSQSDFYTEDV 147

  Fly   145 TAACLFVLGIDTLDRDSLSEDYVRNVPSRLARLPYWNNGRNHIIFNLYSGTWPDYAENSLGFDAG 209
            :.||||:..||.|:::||.   ::.....||:||.|:.|.||::||:..|..||| ..:|.....
 Frog   148 SRACLFLPSIDVLNQNSLR---IKETAQALAQLPRWDRGSNHLLFNMLPGGPPDY-NTALDVPRD 208

  Fly   210 EAILAKASMGVLQLRHGFDVSIPLFHK-----QFPLRAGATGTVQSNNFPANKKYLLAFKGKRYV 269
            .|:||.........|.|:|||||::..     ..|.:|           |..:.:.| ...:..:
 Frog   209 RALLAGGGFSTWTYRQGYDVSIPVYSSLSAEVNLPEKA-----------PGPRAHFL-LSSQTSL 261

  Fly   270 HGIGSETRNSL--FHLHNGRDMVLVTTCRHGKSWRELQDNRCDEDNREYDR--YDYETLLQNSTF 330
            |   .|.|:.|  ....||..::::..|.:..........||      |..  |||..:||.|||
 Frog   262 H---PEFRSELEAIRAENGESVLILEKCSNYTDGAAAHRKRC------YRNVVYDYPQILQESTF 317

  Fly   331 CLVPRGRRLGSFRFLEALQAGCIPVLLSNAWVLPFESKIDWKQAAIWADERLLLQVPDIVRSIPA 395
            |:|.||.|||.....:.|||||:||::::::||||...:|||:|::...|..:.::..|::::|.
 Frog   318 CIVLRGARLGQSVLSDVLQAGCVPVIIADSYVLPFSEVLDWKRASVVIPEEKMFEMYSILQAVPQ 382

  Fly   396 ERIFALRQQTQVLWERYFGSIEKIVFTTFEIIRERLPDYPVRSSLVWNSSPGAL-------LTLP 453
            .::..:::|.:..||.||.|::.|...|.:||.:|:..|..||...||..|...       |.||
 Frog   383 RQLEEMQRQARWFWEGYFSSMKSIALATLQIINDRIYPYAARSYEEWNGPPAVQWSSVNNPLFLP 447

  Fly   454 TFADSSRYMPFLLNSMGAEPRHNYTAVI--YVQIGAALGPNAALYKLVRTITKSQFVERILVLWA 516
            .....|:               .:|||:  |.::       .:|::::..::|...:.::||:|.
 Frog   448 LIPPQSQ---------------GFTAVVLTYDRV-------ESLFRVITEVSKVPSLSKLLVVWN 490

  Fly   517 ADRPLPLKKRWPPTSHIPLHVISLGGSTRSQGAGPTSQTTEGRPSISQRFLPYDEIQTDAVLSLD 581
            .....|.:....|...:||.|:               :|||.:  :|.||.||.||:|:|||::|
 Frog   491 NQNKNPPEVSVWPKIRVPLKVV---------------KTTENK--LSNRFFPYSEIETEAVLAID 538

  Fly   582 EDAI-LNTDELDFAYTVWRDFPERIVGYPARAHFWDDSKNAWGYTSKWTNYYSIVLTGAAFYHRY 645
            :|.| |.:|||.|.|.|||:||:|:||||.|.|.||...:.|.|.|:|||..|:|||||||||:|
 Frog   539 DDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMSKWKYESEWTNEVSMVLTGAAFYHKY 603

  Fly   646 YNYLYT--------NWLSLLLLKTVQQSSNCEDILMNLLVSHVTRKPPIKVTQRKGYKDRE---- 698
            :|||||        ||        |....|||||.||.||::||.|.|||||.||.:|..|    
 Frog   604 FNYLYTYKMPGDIKNW--------VDAHMNCEDIAMNFLVANVTGKAPIKVTPRKKFKCPECTAI 660

  Fly   699 TGRSPWNDPDHFIQRQSCLNTFAAVFGYMPLIRSNLRMDPMLYRDPVSNLRKKYRQIELVGS 760
            .|.|  .|..|.::|..|:|.||:|||.|||.....|.||:||:|   :..:|.:....:||
 Frog   661 DGLS--LDQTHMVERSECINKFASVFGTMPLKVVEHRADPVLYKD---DFPEKLKSFPNIGS 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttvNP_001356963.1 Exostosin 102..393 CDD:397245 96/304 (32%)
Glyco_transf_64 477..737 CDD:430488 113/274 (41%)
ext2NP_001120887.1 Exostosin 100..380 CDD:397245 96/306 (31%)
Glyco_transf_64 456..697 CDD:430488 113/274 (41%)

Return to query results.
Submit another query.