DRSC/TRiP Functional Genomics Resources

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Protein Alignment L and CG31365

DIOPT Version :10

Sequence 1:NP_001188929.1 Gene:L / 36609 FlyBaseID:FBgn0288433 Length:1366 Species:Drosophila melanogaster
Sequence 2:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster


Alignment Length:574 Identity:121/574 - (21%)
Similarity:203/574 - (35%) Gaps:162/574 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EPKEELLSGDEDNEDNEGEDEDEEVADEVAPEGGG---GERPQLVPNESQQQSWPTAD--EPAAP 87
            |.::||.   |:......:|...||::::..|...   ||. ::...|.:...|.:.|  ||...
  Fly   177 EVRKELA---EEVRSQVRDDLRNEVSEDIRKEQLAMLLGEL-EVYLTEKKAGRWESLDGSEPETK 237

  Fly    88 AAVAKEEEAEEGSEELQHPRDEVVASDAAANANGHCKSSGHEEDAVDAE-EP--------EDLEL 143
            ..| ||:.:...|:....|:......||...|....|.:..||..:... :|        :.|||
  Fly   238 PQV-KEDASPSRSKTKALPKRRPSLVDANLKATEARKDAKEEEFILGCNTDPANNSDVNIDGLEL 301

  Fly   144 DDELLSLSGDEDYDDEELQSLDSFYSDMYSTHTSSSYSPSISDGTMTPNSHHLIGAPTAAGQEDH 208
            |:|:.:.|| ||:.:..:...|..::|....:..:|.|....:...||......|..:...:|| 
  Fly   302 DEEVPAESG-EDFREINMVGSDVVHTDNGEIYIINSASSEDQNQDSTPEFDQDNGITSYNIKED- 364

  Fly   209 PTEGKINGGAD-------------GEDLPKPKRLPHFHHH------HHHHYHHQQALKIANKLRK 254
               |:|....:             ||::.:.:::..||.:      ..:....|..||     ||
  Fly   365 ---GEIQFSGEKPEEIEDVVVFNLGEEISQEQQVFSFHENVIIVEKEQNDRDEQTPLK-----RK 421

  Fly   255 INKEA--KMGATAGGGATGAASKFDKLTGEGIKSRGDGSYQCQFCEKTFPRLGYLKHHVQSHAEH 317
            .:.|.  |..::.....||      ::| :.:|     |:||..|...||....|..|..:|.:.
  Fly   422 RSSELVFKQESSCPQPKTG------RIT-DTVK-----SFQCHLCPVAFPTQKLLTRHHNTHIKG 474

  Fly   318 L------PFKCEYCSKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPF 376
            |      ..||..|:.......|..||..:||..:.:||..||.:||:.:.||.||.||...|..
  Fly   475 LKSGKGGTLKCPSCALQLSCASSLKRHMIIHTGLKPFKCSECELSFSQREVLKRHMDTHTGVKRH 539

  Fly   377 QCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASVSSNGSLQKRRYAL 441
            ||..|    ::..|..|::|:|....                                       
  Fly   540 QCPQC----SSCFAQKSNLQQHIGRV--------------------------------------- 561

  Fly   442 ALASDSSPSRMDFPKRSRSNHVGGTTTTATPTPLLRCSYCPKVTEFSSLEQLNAHLQSVHEQPQT 506
                                |:|.:.|.       :|..|.:  .|:.:..|:.||       .|
  Fly   562 --------------------HMGNSRTH-------KCHLCHR--SFNHVSGLSRHL-------VT 590

  Fly   507 QAVKTPVQEGEGFQLSCEYCTMKFGNIAGLFQHMRSTH------MDRLSSPNSY 554
            .|         |...||:.|..:|.:.:.:.:|:.:.|      .|.:|..|.:
  Fly   591 HA---------GVMFSCKQCGRQFNDRSAVQRHVTTMHKVKNKLTDYISETNEF 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LNP_001188929.1 C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
C2H2 Zn finger 322..342 CDD:275368 5/19 (26%)
COG5048 336..769 CDD:227381 45/225 (20%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 5/19 (26%)
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
C2H2 Zn finger 689..707 CDD:275368
C2H2 Zn finger 1020..1041 CDD:275368
C2H2 Zn finger 1049..1069 CDD:275368
C2H2 Zn finger 1197..1217 CDD:275368
C2H2 Zn finger 1229..1246 CDD:275368
C2H2 Zn finger 1258..1278 CDD:275368
CG31365NP_732827.1 zf-AD 13..86 CDD:214871
PTZ00121 <110..354 CDD:173412 42/182 (23%)
zf-C2H2_8 454..542 CDD:464935 29/87 (33%)
C2H2 Zn finger 485..505 CDD:275368 5/19 (26%)
zf-H2C2_2 497..522 CDD:463886 10/24 (42%)
C2H2 Zn finger 513..533 CDD:275368 9/19 (47%)
zf-H2C2_2 526..550 CDD:463886 10/27 (37%)
C2H2 Zn finger 541..562 CDD:275368 6/83 (7%)
C2H2 Zn finger 571..591 CDD:275368 6/28 (21%)
C2H2 Zn finger 598..617 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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