DRSC/TRiP Functional Genomics Resources

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Protein Alignment Achl and SRO9

DIOPT Version :9

Sequence 1:NP_001286419.1 Gene:Achl / 36605 FlyBaseID:FBgn0033936 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_009893.2 Gene:SRO9 / 850320 SGDID:S000000542 Length:434 Species:Saccharomyces cerevisiae


Alignment Length:511 Identity:110/511 - (21%)
Similarity:178/511 - (34%) Gaps:176/511 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VDPTPILAPILTAVPVMKAP-DSPAS------MDKTKEMEELDDEQPSCSSQAVVPLSSSLPCKL 88
            |:.||  ||:.|:.|...|| :.|.|      :|.|::.:.......|.::...||:.:|:... 
Yeast    29 VNLTP--APLPTSSPWKLAPTEIPVSTISIEDLDATRKKKNRTPTPKSSTATKWVPIKASITVS- 90

  Fly    89 LRMHARRSAQALLHQMESMDSQLGSSNGSTSE---------DTSPSAPPMSPTDH--------QL 136
               ..:||.           |:.|:|||::::         .||.|........|        |:
Yeast    91 ---GTKRSG-----------SKNGASNGNSNKSKNNKTAASSTSSSNANRKKKHHQHNAKKQQQM 141

  Fly   137 VDVGMGSSIGDSDE----SSEEGDELKPLAVDNHIIAEVDLTERQTTPPAVLSEANLEKFRKHQM 197
            ...|..|::|:.|.    |.|.|.                 :.:|..||         ..|.|..
Yeast   142 KKDGFESAVGEEDSKDATSQENGQ-----------------STQQQQPP---------HHRNHHH 180

  Fly   198 DNIYLHPNFTLDASPPPAVAPANSPVLEAKRTHRSFLTMKKEKEVEPPQEK-------------- 248
            .:   |.|             :|.|  :.::.|.|......:.:..|||.|              
Yeast   181 SH---HHN-------------SNGP--QRRKFHNSNNAGMPQNQGFPPQFKPYQGRNARNNNNNR 227

  Fly   249 -EQEVPVHQEQDTEPQGP-----NEIDTLDPSLIPSEELAAEITDAVEFYFSNESILKDAFLLKH 307
             :.....|..|. .||.|     .:...:.|.|:....:|.:|    |:|||.|::..|.:|  .
Yeast   228 SKYHNHFHHNQQ-HPQQPMVKLQQQFYPVQPVLMAINNIARQI----EYYFSEENLTVDNYL--R 285

  Fly   308 VRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDA--VRRKSRKIELNDV-------GTKVRRIEPL 363
            .:.:|:||..|.|:|.|.||..::    ..||.  :....|:|..|:.       ||...:....
Yeast   286 SKLSKDGFAPLSLISKFYRVVNMS----FGGDTNLILAALREIVANEAATVNVAEGTLAAKEGDN 346

  Fly   364 PSFDETMPSRTIVACDLPLDKLTIEKVS------DLFSPCGEIALIRILKPGMAIPVDVRQFMNK 422
            .:.:...||        ||||..:...|      :.|.     ..|.|.|..:...:|  |||..
Yeast   347 VTGEAKEPS--------PLDKYFVRSKSWSNWLPETFE-----TEINIEKELVGDALD--QFMIS 396

  Fly   423 YPELQQKECALVEYLESSSARDARHLNGPFQVYEMVAPKKKTGKKAAVIQIAAPVA 478
            .|.:.|:|       |.||.             |:.:.:::|.:.      :||||
Yeast   397 LPPVPQQE-------EESST-------------ELASQEQETKED------SAPVA 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AchlNP_001286419.1 LARP_6 282..359 CDD:153402 25/85 (29%)
RRM_LARP6 373..472 CDD:240735 21/104 (20%)
SRO9NP_009893.2 LHP1 1..434 CDD:227520 110/511 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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