Sequence 1: | NP_001286419.1 | Gene: | Achl / 36605 | FlyBaseID: | FBgn0033936 | Length: | 867 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_566004.1 | Gene: | LARP6b / 819002 | AraportID: | AT2G43970 | Length: | 545 | Species: | Arabidopsis thaliana |
Alignment Length: | 551 | Identity: | 118/551 - (21%) |
---|---|---|---|
Similarity: | 202/551 - (36%) | Gaps: | 109/551 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 125 SAPPMSPTDHQLVDVGMGSSIGDSDESSEEGDE--LKPLAVDNHIIAEVDLTERQTTPPAVLSEA 187
Fly 188 N---LEKFRKHQMDNIYLH-PNFTLDASPPPAVAPANSPVLEAKRTHRSFLTMKKEKEVEPPQEK 248
Fly 249 EQEVPVHQEQDTEPQG-------PNEI----DTLDPSLIPS---------------------EEL 281
Fly 282 AAEITDAVEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKSR 346
Fly 347 KIELNDVGTKVRRIEPL-PSFDETMPSRTIVACDLPLDKLTIEKVSDLFSPCGEIALIRILKP-- 408
Fly 409 -GMAIPVDVRQ--------FMNK------YPELQQKECALVEYLESSSARDARHLNGPFQVYEMV 458
Fly 459 APKKKTGK-------------KAAVIQIAAPVARMVENYRYYNDANYERSRGGSFSGHETVPDLR 510
Fly 511 FKLKR-----------------NNSDFQPSYYQQTGPSYHANPYQHY---QPRGSIGNQNQEVGP 555
Fly 556 NGFFGYGPRRYSNTSTISANTAAALGDVSPI 586 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Achl | NP_001286419.1 | LARP_6 | 282..359 | CDD:153402 | 21/76 (28%) |
RRM_LARP6 | 373..472 | CDD:240735 | 29/128 (23%) | ||
LARP6b | NP_566004.1 | LARP_6 | 194..270 | CDD:153402 | 21/76 (28%) |
RRM_La_like_plant | 285..380 | CDD:240734 | 25/95 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm2425 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22792 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.870 |