Protein Alignment Achl and La

DIOPT Version :9

• Sequence 1: NP_001286419.1
• Gene: Achl / 36605
• FlyBaseID: FBgn0033936
• Length: 867
• Species: Drosophila melanogaster
• Sequence 2: NP_477014.1
• Gene: La / 35305
• FlyBaseID: FBgn0011638
• Length: 390
• Species: Drosophila melanogaster
• Alignment Length: 324
• Identity: 74/324 - (22%)
• Similarity: 126/324 - (38%)
• Gaps: 76/324 - (23%)

  Fly   244 PPQEKEQEVPVHQEQDTEPQ---GPNEIDTLDPSLIPSEELAA--------EITDAVEFYFSNES 297
            |..|.::||    .|..|.|   ..|.....||:  |:.|.||        .|...||:||.:.:
  Fly     8 PSVEAQEEV----AQPAEAQVLEAKNGDAKKDPA--PAAEEAAGGFTKQERAIIRQVEYYFGDAN 66

  Fly   298 ILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKSR-KIELNDVGTKVRR-- 359
            :.:|.||.:.:.:|::|:|.|.::.:|||:..|:.:...:..|:.:... .:|:::....:||
  Fly    67 LNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKSEEGLVEISEDKLSLRRHP 131

  Fly   360 IEPLPSFDE----TMPSRTIVACDLPLD-----------------KLTIEKVSDLFSPC------ 397
            ..|:|..:|    .:..||..|...|||                 .||:.|..|  .|.
  Fly   132 ERPIPEHNEERRKEIQERTAYAKGFPLDSQISELLDFAANYDKVVNLTMRKHYD--KPTKSYKFK 194

  Fly   398 GEIALIRILKPGMAIPVDVRQFMNKYPELQQKECALVEYLESSSARDARHLNGPFQVYEMVAPKK 462
            |.|.|....|......::..:.:.|..||.:|  ..|:||:...           :.|.....|:
  Fly   195 GSIFLTFETKDQAKAFLEQEKIVYKERELLRK--WQVDYLKEKQ-----------EEYAQKNEKR 246

  Fly   463 KTGKKAAVIQIAAPVARMVENYRYYNDANYERSRGGSFSGHETVPDLRFKLKRNNSDFQPSYYQ 526
            |..|:|.    ..|...:.:|.....:...|.      |..|.:.:...|:|    ||:.:|.:
  Fly   247 KNKKEAK----PEPAFELPKNAIVVFEGAPET------SSREEIREAFEKIK----DFEVAYIE 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Achl	NP_001286419.1	LARP_6	282..359	CDD:153402	20/85 (24%)
		RRM_LARP6	373..472	CDD:240735	27/121 (22%)
La	NP_477014.1	LARP_3	47..129	CDD:153397	18/81 (22%)
		RRM1_La	150..226	CDD:240737	17/77 (22%)
		RRM_SF	263..338	CDD:302621	9/44 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456184
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR22792
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940