Protein Alignment Achl and Larp1b

DIOPT Version :9

• Sequence 1: NP_001286419.1
• Gene: Achl / 36605
• FlyBaseID: FBgn0033936
• Length: 867
• Species: Drosophila melanogaster
• Sequence 2: XP_038958171.1
• Gene: Larp1b / 310348
• RGDID: 1307509
• Length: 537
• Species: Rattus norvegicus
• Alignment Length: 448
• Identity: 94/448 - (20%)
• Similarity: 161/448 - (35%)
• Gaps: 140/448 - (31%)

  Fly    12 YEVKAPHAGAEGHTFLVSPVDPTPILAPILTAVPVMKAPDSPASMDKTKEMEE------LDDEQP 70
            ::.:||.....|.    :|..|.|       ..|....|..||..|..:::.|      |:|:.|
  Rat    90 HKARAPGGPFGGE----APPPPPP-------PPPPPPPPPPPAPRDPPEDVREDPAAAGLEDKPP 143

  Fly    71 SCSSQAVVPLSSSLP-CKLLRMH-----------ARRSAQALLHQMESMDS-QLGSSNGSTSEDT 122
                    ||....| .|.|..|           |:.|.:|.|...:.:.: :|.:...:.:.|.
  Rat   144 --------PLPKGNPWTKKLPQHLSPVGTGVPPPAQDSPEAELSSPKIIKAGKLKTKKSNKASDF 200

  Fly   123 SPSAPPMSPTDHQLVDVGMGSSIGDSDE---------------SSEEGDELKPLAVDNHIIAEVD 172
            |..|  ..||..:||:.|..|.|...::               |:.|..|.:...:|.. |..|.
  Rat   201 SDMA--NWPTPGELVNTGSQSVISQGNKKPQIRKEKEEKIEKRSNSESKENREAKLDGP-IENVS 262

  Fly   173 LTERQTTPPAVLSEANLEKFRKHQMDNIYLHPNFTLDASPPPAVAP-----------ANSPVLEA 226
            ..|.|       |.:..::..||:...::|.     |..|.....|           ||.|.
  Rat   263 EDEAQ-------SSSQRKRANKHKWVPLHLD-----DVRPDSQERPGSRNSSRCQPEANKPA--- 312

  Fly   227 KRTHRSFLTMKKEKEVEPPQEKEQEVPVHQE---------------------------------- 257
             ..:|...|....::.|...::::...|..|
  Rat   313 -HNNRKSDTRSWRRDREKRDDQDEVSSVRSEGGTIRGSTRGRGRGRGRGRGRGRGNPRLNFDYSY 376

  Fly   258 ------QDTEPQGPNEIDT---------LDPSLIPSEE--LAAEITDAVEFYFSNESILKDAFLL 305
                  :.||...|.|::|         ....:.|.||  |...|...:|:|||.|::.:|.||.
  Rat   377 GYREPGERTEQPFPTELNTSMMYYYDDGTGVQVYPVEETLLKEYIKRQIEYYFSIENLERDFFLR 441

  Fly   306 KHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRKSRKIELNDVGTKVR-RIEP 362
            :  :.:::||:.:.|::.|.||:.||....::.:|: :.|.::|:  |..|:| :|||
  Rat   442 R--KMDEQGFLPISLIAGFHRVQALTTNLNLILEAL-KDSTEVEI--VDEKMRKKIEP 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Achl	NP_001286419.1	LARP_6	282..359	CDD:153402	23/77 (30%)
		RRM_LARP6	373..472	CDD:240735
Larp1b	XP_038958171.1	LARP_2	418..490	CDD:153407	22/76 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5193
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900