DRSC/TRiP Functional Genomics Resources

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Protein Alignment Achl and SPAC1527.03

DIOPT Version :9

Sequence 1:NP_001286419.1 Gene:Achl / 36605 FlyBaseID:FBgn0033936 Length:867 Species:Drosophila melanogaster
Sequence 2:NP_594554.1 Gene:SPAC1527.03 / 2541645 PomBaseID:SPAC1527.03 Length:475 Species:Schizosaccharomyces pombe


Alignment Length:345 Identity:73/345 - (21%)
Similarity:131/345 - (37%) Gaps:75/345 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SPASMDKTKEMEEL-DDEQPSCSSQA--------------VVPLSSSLPCKLLRMHARRSAQALL 101
            ||...:|..|..:| ||.|...:.:|              ..|:|:....:.....:||:...  
pombe   116 SPEIAEKQVEDRKLSDDSQKPLAPKANGKEKWVTITPNFTHTPISNRKSSRSRNDGSRRNGNG-- 178

  Fly   102 HQMESMDSQLG--SSNGSTSEDTSPSAPPMSPTDHQLVDVGMGSSIGDSDESSEEGDELKPLAVD 164
                   .:.|  ||:||....|:.|.           :.....||..|:.|:|..|::      
pombe   179 -------RRRGNYSSHGSNKRQTNYSR-----------EKDASRSIDSSNPSAEYRDDI------ 219

  Fly   165 NHIIAEVDLTERQTTPPAVLSEANLEKFRKHQMDNIYLHPNFTLDASPPPAVAPANSPVLEAKRT 229
                       ..|.....:|.||.::..:...|:....|:.:..:...|:....|....:...:
pombe   220 -----------NNTFGSQTVSSANGKEVPQTSEDSSSQAPHHSSSSGHAPSQQGGNKHSYKKSDS 273

  Fly   230 HRSFLTMKKEKEVEPPQEKEQEVPVHQEQDTEPQGPN-----EIDTLDPSLIPSEELAAEITDAV 289
            .:||  ..|.:.....|........:...:.:...||     ..:.::|.|.   ::.|.:|..:
pombe   274 QQSF--HHKGRNTRKGQRHNNGFYRNIANNIQGPFPNYPVVVNGNGVNPYLC---DVQAFLTSQL 333

  Fly   290 EFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTREWKVVGDAVRRK---SRKIEL- 350
            |:|||.|::.||.||.||:  :.||:|.|..::||.|::..:.:..::..|.:..   ...|:| 
pombe   334 EYYFSIENLCKDMFLRKHM--DDEGYVPLAFLASFNRIKSFSTDLNLLHAACKASDIIDVAIDLQ 396

  Fly   351 NDVGTKVRRIEP-----LPS 365
            :.:..||||.|.     |||
pombe   397 SPMSIKVRRKETWSPWILPS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AchlNP_001286419.1 LARP_6 282..359 CDD:153402 25/80 (31%)
RRM_LARP6 373..472 CDD:240735
SPAC1527.03NP_594554.1 LHP1 4..473 CDD:227520 73/345 (21%)
LA 323..406 CDD:128955 26/87 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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