| Sequence 1: | NP_001286419.1 | Gene: | Achl / 36605 | FlyBaseID: | FBgn0033936 | Length: | 867 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001271452.1 | Gene: | Larp4 / 207214 | MGIID: | 2443114 | Length: | 720 | Species: | Mus musculus |
| Alignment Length: | 474 | Identity: | 99/474 - (20%) |
|---|---|---|---|
| Similarity: | 170/474 - (35%) | Gaps: | 137/474 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 214 PAVAPANSPVLEAKRTHRSFLT--------------MKKEKEV--EPPQEKEQE-VPVHQEQDTE 261
Fly 262 PQGPN-------EIDTLDPSLIPSEELAAEITDAVEFYFSNESILKDAFLLKHVRRNKEGFVSLK 319
Fly 320 LVSSFKRVRQLTREWKVVGDAVRRKSRKIELNDVGTKVRRIEPLPSFDETMPSRTIVACDLPLDK 384
Fly 385 LTIEKVSDLF--SPCGEIALIRILKPGMAIPVDVRQFMNKYPELQQKECALVE----YLESSSAR 443
Fly 444 DARHLNGPFQVYEMVAPKKKTGK-KAAVIQIAAPVARMVEN-YRYYNDANYERSRGGSFSGHETV 506
Fly 507 PDLRFKLKRNNSDFQPSYYQQTGPSYHANPYQHYQ------PRGSIGNQNQEVGPNGFFGYG--- 562
Fly 563 ------------PR-------RYSNTSTISANTAAALGDVSPISSA-----VNSGGNPMVSGISS 603
Fly 604 LQRRLSNCSEQNYTPEVNP 622 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Achl | NP_001286419.1 | LARP_6 | 282..359 | CDD:153402 | 19/76 (25%) |
| RRM_LARP6 | 373..472 | CDD:240735 | 15/105 (14%) | ||
| Larp4 | NP_001271452.1 | Interaction with PABPC1. /evidence=ECO:0000250|UniProtKB:Q71RC2 | 13..22 | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 22..56 | 7/30 (23%) | |||
| Interaction with the poly-A tract of mRNA. /evidence=ECO:0000250|UniProtKB:Q71RC2 | 108..300 | 47/242 (19%) | |||
| LARP_4 | 117..191 | CDD:153404 | 20/81 (25%) | ||
| RRM_LARP4 | 196..272 | CDD:241151 | 17/114 (15%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 364..399 | 10/35 (29%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 438..471 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 530..563 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 577..602 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 616..720 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||