DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sin1 and AVO1

DIOPT Version :9

Sequence 1:NP_610963.1 Gene:Sin1 / 36604 FlyBaseID:FBgn0033935 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_014563.1 Gene:AVO1 / 854076 SGDID:S000005438 Length:1176 Species:Saccharomyces cerevisiae


Alignment Length:645 Identity:125/645 - (19%)
Similarity:221/645 - (34%) Gaps:178/645 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YSNQHWLLSHIRNSFISTDDTG--MCETVMLSDDMPKH----YLRKFGNSGAGGDHYHWRRAHKT 62
            ||.:.:     .|:..||.::|  ..::.|.::.:|.|    .::|:|       .||       
Yeast   459 YSEERY-----SNNDSSTMESGEMSLDSDMQTNTIPSHSIPMSMQKYG-------IYH------- 504

  Fly    63 PPTGGGTTPERN-----------TRHPDAPLQEVDFICYPGLDLSDDEEDMSTHS---FDIQ--- 110
               |...:...|           :|||......|         :|..|....|.|   |.:.   
Yeast   505 ---GDDDSTLNNVFDKAVLTMNSSRHPKERRDTV---------ISGKEPTSLTSSNRKFSVSSNL 557

  Fly   111 ---MYPEVGAHRFRSNTA----QKLEKL-DIAKRRAARIKSVNYQEEVQPPESDDFFKRKE---- 163
               ..|.:..|...|:||    .|..|: |....||.:......|:..||.......|..:    
Yeast   558 TSTRSPLLRGHGRTSSTASSEHMKAPKVSDSVLHRARKSTLTLKQDHSQPSVPSSVHKSSKEGNI 622

  Fly   164 LPLSKAERVKNEPKANDDDLSDEGVQSQLTEQLAKSPKQAQNRFIE----FARFDGTSQVGMQTK 224
            |.....:.:.::|||           |||:....|..|:.....::    |:...|......::.
Yeast   623 LIEKTTDYLVSKPKA-----------SQLSNMFNKKKKRTNTNSVDVLEYFSFVCGDKVPNYESM 676

  Fly   225 RINVFLNMLPEPDRN-YPLKICVVATAKIQEVIGFVCYRTSLQ-YPD---------VPLKSLQHY 278
            .:.:::....:..|| :..|:...:|  |.|||||..:..|.: .||         ..:.:..::
Yeast   677 GLEIYIQASKKYKRNSFTTKVRKSST--IFEVIGFALFLYSTEKKPDNFEEDGLTVEDISNPNNF 739

  Fly   279 AL-YMTEDNDDMED-FPPLDNREPCSKFGFSQLTL-----AERRPLAPVTRVDYHSQLGSKSMTS 336
            :| .:.||.:..|| |..||.:........|::.|     ||:......|.:.:.:..|....::
Yeast   740 SLKIVDEDGEPFEDNFGKLDRKSTIQSISDSEVVLCKVDDAEKSQNEIETPLPFETGGGLMDAST 804

  Fly   337 VEDKTA--LSDAAVKALQNISLNGGTSDPGGGGGGGD------------SPHDNVKEYEKRLLNH 387
            ::..::  .:|..:..|.......|..|......|..            :|..|.......:.:|
Yeast   805 LDANSSHDTTDGTINQLSFYKPIIGNEDDIDKTNGSKIIDVTVYLYPNVNPKFNYTTISVLVTSH 869

  Fly   388 -NDMLEA--------PMHRTFRLNIIDKRFF--KSDVTLGISG-ERIEIDQCKNA------KFWP 434
             ||:|..        |  ..:.|.::.|.:.  .:|..|.:.| .::|:...|:|      |..|
Yeast   870 INDILVKYCKMKNMDP--NEYALKVLGKNYILDLNDTVLRLDGINKVELISKKDARELHLEKMKP 932

  Fly   435 Q-KKPV--------STPIDFVAHCEILE--RRHLKA-----------LLRIWLKSNSSSPSFSTG 477
            . ||||        .||:       .||  ..:|||           ..::..|:...|..:..|
Yeast   933 DLKKPVLPTIQSNDLTPL-------TLEPLNSYLKADAGGAVAAIPENTKVTSKAKKISTKYKLG 990

  Fly   478 CTSAPINASVTTLNAGSGSGGIAHSPSSPGHSSGLFSSSNIRFKHYDFDTDTHTAEQIHN 537
            ......::||.: .:.|.:||:|       :.:|.|.:.|      ...:..|...|.||
Yeast   991 LAKQHSSSSVAS-GSVSTAGGLA-------NGNGFFKNKN------SSKSSLHGTLQFHN 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sin1NP_610963.1 SIN1 18..164 CDD:283156 35/180 (19%)
CRIM 189..316 CDD:293583 32/148 (22%)
SIN1_PH 394..545 CDD:293584 38/175 (22%)
AVO1NP_014563.1 CRIM 638..786 CDD:407188 32/149 (21%)
PH_Avo1 1066..1172 CDD:270139
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344382
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3739
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004857
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13335
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1337
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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